Jatropha Genome Database

JcCB0477181.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0477181.10 + phase: 0 /partial
         (378 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01479                                                            749   0.0  

>KJC_c01479 
          Length = 1409

 Score =  749 bits (378), Expect = 0.0
 Identities = 378/378 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgagaagatcaccgatgatattcttttgcaattgactaatcgggctcaaggtaacttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aatgagaagatcaccgatgatattcttttgcaattgactaatcgggctcaaggtaacttg 405

                                                                       
Query: 61  caatgtttgagcctgattgagtgtccaaggattactgatgatgggttgaaacatgtcctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 caatgtttgagcctgattgagtgtccaaggattactgatgatgggttgaaacatgtcctt 465

                                                                       
Query: 121 gaaaataatccgaggctaaccaagctgagtgtgcctggatgtacaagactcagcattgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaaaataatccgaggctaaccaagctgagtgtgcctggatgtacaagactcagcattgag 525

                                                                       
Query: 181 ggcatcgtaactagcttaaaggcttttaggagtatgggtacacaaggggtgaagcattta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ggcatcgtaactagcttaaaggcttttaggagtatgggtacacaaggggtgaagcattta 585

                                                                       
Query: 241 aggattggtggcctctatggagtgacacagaagcactttgaagaactgaagttcttgttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 aggattggtggcctctatggagtgacacagaagcactttgaagaactgaagttcttgttg 645

                                                                       
Query: 301 ggctcagataaccatatgcagcagaatacctacaagccacattattatcacagagggaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ggctcagataaccatatgcagcagaatacctacaagccacattattatcacagagggaac 705

                             
Query: 361 ttttatttgtcatgtgag 378
           ||||||||||||||||||
Sbjct: 706 ttttatttgtcatgtgag 723