Jatropha Genome Database

JcCB0470521.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0470521.10 + phase: 0 
         (261 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00209                                                            143   2e-34

>KJC_c00209 
          Length = 1134

 Score =  143 bits (72), Expect = 2e-34
 Identities = 141/164 (85%)
 Strand = Plus / Plus

                                                                       
Query: 49  ttcttcattgaccatcctggtgcagcgcccattactactgcgcagggagaggaactgaga 108
           |||||||| || || |||||||||| |||||| || || || ||||| ||||||||||||
Sbjct: 544 ttcttcatagatcaccctggtgcagtgcccatcaccacagctcagggggaggaactgaga 603

                                                                       
Query: 109 aaacttattggagctcctgcctacattgagtgtagctcaaaaacacagcagaatgtgaag 168
           || || |||||||||||||  |||||||||||||| || ||||| |||||||||||||| 
Sbjct: 604 aagctaattggagctcctgtttacattgagtgtagttctaaaactcagcagaatgtgaaa 663

                                                       
Query: 169 ggagtttttgatgcagccatcaaggtggttctgcagcccccaaa 212
           | ||| |||||||||||||| || |||||||| ||||| |||||
Sbjct: 664 gcagtctttgatgcagccattaaagtggttctccagccaccaaa 707