Jatropha Genome Database
- JcCB0469261.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0469261.10 - phase: 0 /partial
(1206 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06320 1540 0.0
>KJC_c06320
Length = 880
Score = 1540 bits (777), Expect = 0.0
Identities = 807/812 (99%), Gaps = 4/812 (0%)
Strand = Plus / Plus
Query: 1 atgtatacagtgaaacaactatctcctttgaagtcaaagatcaattcccggcgatcaccg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 73 atgtatacagtgaaacaactatcncctttgaagtcaaagatcaattcccggcgatcaccg 132
Query: 61 gcggtaggagtcgccggaaacaacggtgttaagctaacgactcgagtgccggtttcacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gcggtaggagtcgccggaaacaacggtgttaagctaacgactcgagtgccggtttcacgc 192
Query: 121 gtcaattatggtagttcaatccgagcagcgataagtagcgaagacaagactgtagagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gtcaattatggtagttcaatccgagcagcgataagtagcgaagacaagactgtagagtct 252
Query: 181 gccaagtctaataataatgaaataagagggcgatcagtgttgtcttcttctttggatgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gccaagtctaataataatgaaataagagggcgatcagtgttgtcttcttctttggatgag 312
Query: 241 aaaaaaggaagaggaattgatgtaagagctgtcattactataaggaagaaaatgaaagaa 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaaa-aggaagaggaattgatgtaagagctgtcattactataaggaagaaaatgaaagaa 371
Query: 301 aagatcaatgaaaaatttgatgatcaatgggagtattttgttaatggcattggtcaaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aagatcaatgaaaaatttgatgatcaatgggagtattttgttaatggcattggtcaaggg 431
Query: 361 attttaattcaacttattagtgaagaaattgatcctgtgaccaactcaggaaagagtgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 attttaattcaacttattagtgaagaaattgatcctgtgaccaactcaggaaagagtgtg 491
Query: 421 aagtctactgtgagaggctggttgccaaagccatcaaaccatgctcatattattgaatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aagtctactgtgagaggctggttgccaaagccatcaaaccatgctcatattattgaatat 551
Query: 481 gcagctgatttcacagtcccgtatgattttggtaatccaggagctgttcttattaccaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gcagctgatttcacagtcccgtatgattttggtaatccaggagctgttcttattaccaat 611
Query: 541 cttcatggaaaagaattctacttggtggagattgttattcatggctttgatggaagtcct 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cttcatggaaaag-attctacttggtggagattgttattcatggctttgatggaagtcct 670
Query: 601 tttttcttttctgcaaatacatggatccattcccaaaaagataaccctgaaagtagaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 671 tttttcttttctgcaaatacatggatccattcccaaaaagataaccctg-aagtagaatt 729
Query: 661 atctttagaaatcaagcatatttgccatcacaaacacctcctggcattaaagatctccgg 720
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 730 atctttagaaatcaagcatatttgccatcacaaacacct-ctggcattaaagatctccgg 788
Query: 721 catgaagacttgcttagcattcgtggtaatggaaaaggcaagagaaagccttatgataga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 catgaagacttgcttagcattcgtggtaatggaaaaggcaagagaaagccttatgataga 848
Query: 781 atttatgattatgctacttataatgatttagg 812
||||||||||||||||||||||||||||||||
Sbjct: 849 atttatgattatgctacttataatgatttagg 880