Jatropha Genome Database

JcCB0468081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0468081.10 - phase: 0 /pseudo
         (1284 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05983                                                            914   0.0  

>KJC_c05983 
          Length = 690

 Score =  914 bits (461), Expect = 0.0
 Identities = 461/461 (100%)
 Strand = Plus / Minus

                                                                        
Query: 685  gttgttctacatgatccatcagctcatagttctccagatggtttgagtagtacttcagaa 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686  gttgttctacatgatccatcagctcatagttctccagatggtttgagtagtacttcagaa 627

                                                                        
Query: 745  gtttcaactttgcagcttgagttcaattatctcagtactgtttctggtgatccaaagtat 804
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626  gtttcaactttgcagcttgagttcaattatctcagtactgtttctggtgatccaaagtat 567

                                                                        
Query: 805  ggagtggaagctatgaaggtcttggcacatatgaagaatcttccaaaagtagaaggtctg 864
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566  ggagtggaagctatgaaggtcttggcacatatgaagaatcttccaaaagtagaaggtctg 507

                                                                        
Query: 865  gtccctatctacataagtcctgccagcggtgaatttagcggagaaaatattagactggga 924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506  gtccctatctacataagtcctgccagcggtgaatttagcggagaaaatattagactggga 447

                                                                        
Query: 925  tctcgtggtgacagttattatgagtacctaatcaaagtatggcttcagcagggaaccagt 984
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446  tctcgtggtgacagttattatgagtacctaatcaaagtatggcttcagcagggaaccagt 387

                                                                        
Query: 985  cgagatgccaattttacatatctatacaacatgtatgaagaggcaataaaaggtgttaga 1044
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386  cgagatgccaattttacatatctatacaacatgtatgaagaggcaataaaaggtgttaga 327

                                                                        
Query: 1045 aacctactcgttcagaaatcaatcccaaatggattggtatttgtgggggaattgcctaat 1104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326  aacctactcgttcagaaatcaatcccaaatggattggtatttgtgggggaattgcctaat 267

                                                     
Query: 1105 ggaccaaagggttcttttagccccaaaatggaccacctggt 1145
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 266  ggaccaaagggttcttttagccccaaaatggaccacctggt 226