Jatropha Genome Database
- JcCB0465351.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0465351.10 - phase: 0
(1611 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02137 198 3e-50
>KJC_c02137
Length = 1494
Score = 198 bits (100), Expect = 3e-50
Identities = 400/500 (80%)
Strand = Plus / Minus
Query: 25 cttaatgcactcgatgttgcaaaaactcaatggtaccatttcacagcaattgtgattgct 84
|||||||| || ||||| |||||||| |||||||| || ||||| |||||| | ||||||
Sbjct: 1394 cttaatgctcttgatgtagcaaaaacacaatggtatcacttcactgcaattataattgct 1335
Query: 85 ggaatgggttttttcacagatgcatatgatcttttttgtatttcattagtcaccaaattg 144
|||||||| ||||| || ||||||||||| | ||||| ||||| | ||||| ||||||
Sbjct: 1334 ggaatggggttttttacggatgcatatgacttgttttgcatttctctggtcactaaattg 1275
Query: 145 cttggtcgtatatactacactgactatgacaaagaaaagccaggcacattacctccaaat 204
||||| |||||||| ||| || ||| |||||||| || || |||||||| |||
Sbjct: 1274 cttggccgtatatattaccatgtggatggtgcggaaaagcctgggactttacctcctaat 1215
Query: 205 gtagcagcagctgttaatggtgttgcactttgtggcactttagctggccagctcttcttt 264
||| ||||||| || |||||||| ||| | ||||| ||| | || |||||||| || |||
Sbjct: 1214 gtatcagcagcagtaaatggtgtagcattctgtggaactcttgcaggccagctatttttt 1155
Query: 265 ggctggcttggtgacaaattgggtagaaagaaagtctatgggataactttggttctcatg 324
||||||||||| || ||| |||| | ||||| |||||||| || ||| | | || |||
Sbjct: 1154 ggctggcttggcgataaaatggggcggaagaaggtctatggtatgactcttatgcttatg 1095
Query: 325 gttgtttgttcacttgcctcgggcctttcctttggaagtagtccaaagggtacaattgcc 384
|| | |||||| |||| || |||||||| ||||| || | |||| | | || |
Sbjct: 1094 gtgatatgttcagttgcttcaggcctttcttttggtcataatgcaaaagcaattatgtca 1035
Query: 385 actctttgtttcttcaggttctggcttggattcggtatcggaggtgattatcccttatca 444
|||||||||||||| ||||||||||||| || |||||||||||||||||||| | ||
Sbjct: 1034 actctttgtttctttcggttctggcttggttttggtatcggaggtgattatccactttct 975
Query: 445 gccacaattatgtctgaatatgctaataaaaagactcgtggggcatttattgctgcggtg 504
|| ||||| ||||||||||||||||| || |||||||| || || ||||||||||| ||
Sbjct: 974 gctacaatcatgtctgaatatgctaacaagaagactcggggcgcttttattgctgctgta 915
Query: 505 tttgctatgcaaggatttgg 524
|||||||||||||| |||||
Sbjct: 914 tttgctatgcaaggttttgg 895
Score = 172 bits (87), Expect = 2e-42
Identities = 355/443 (80%), Gaps = 1/443 (0%)
Strand = Plus / Minus
Query: 907 actacttggttcttattagatattgctttctacagccaaaatcttttccaaaaggatatt 966
||||| |||||||| | || ||||| || ||||| ||||||||||| |||||||||||
Sbjct: 512 actacatggttcttgcttgacattgcattttacagtcaaaatctttttcaaaaggatatc 453
Query: 967 ttcactgcaatcaattggattcctaaagcacaaaaaatgaacgcaattcacgaggttttt 1026
|| | ||| || ||||||||| ||| ||| |||||| || ||| | || |||| |
Sbjct: 452 tttagtgccattgggtggattcctcctgcaaaaacaatgaatgctattgaagaagtttat 393
Query: 1027 aggattgcaagagctcagacactaattgcactatgcagtactgtacctggatactggttc 1086
|| ||||||||||| || || || || || ||||||||||| || || || ||||||||
Sbjct: 392 agaattgcaagagcacaaaccctcatcgctctatgcagtacagttcccggctactggttt 333
Query: 1087 actgtattccttattgactatatgggaagatttgccattcaattgatgggcttcttcttc 1146
|||||| || |||||| | || |||||||| || ||||| |||||||| ||||| |||
Sbjct: 332 actgtagctctcattgacaaaattggaagattcgcaattcagttgatgggattctttttc 273
Query: 1147 atgacagtttttatgttcgcgattgctatcccttaccatcactggaccttggagcctaat 1206
||||||||||||||||| || | ||||| |||||| |||||||||| || ||
Sbjct: 272 atgacagtttttatgtttgcattagctattccttacgatcactggacacataaggaaaac 213
Query: 1207 agaattggttttgttgtaatgtactcactgacatttttctttgccaattttggacccaat 1266
||||||| ||||| |||||||||||| | ||||| |||||||| || |||||||| |||
Sbjct: 212 cgaattggatttgtggtaatgtactcattaacattcttctttgctaactttggacctaat 153
Query: 1267 gccactacatttgttgttccagcagagattttccccgcaagactaagatcaacatgccac 1326
|| ||||||||||||||||| || ||||||||||| |||||| |||| || || |||||
Sbjct: 152 gcaactacatttgttgttccggccgagattttcccagcaagattaaggtctacttgccat 93
Query: 1327 ggtatatctgcagcagcaggaaa 1349
|| ||||| |||||| |||||||
Sbjct: 92 gg-atatcagcagcatcaggaaa 71
Score = 131 bits (66), Expect = 6e-30
Identities = 114/130 (87%)
Strand = Plus / Minus
Query: 671 ttcctgctgccctgacttactactggcgtatgaaaatgcctgaaactgctcgttacacag 730
|||||||||| || |||||||| ||| | ||||||||||||||||||||||||||||| |
Sbjct: 748 ttcctgctgctcttacttactattggagaatgaaaatgcctgaaactgctcgttacactg 689
Query: 731 cccttgttgctaagaatgcaaaactagctgcttcagatatgtctaaagttttaaatgttg 790
||||||| || ||||||||||||| |||||||| |||||||| ||||||||| | ||||
Sbjct: 688 cccttgtagccaagaatgcaaaacaggctgcttctgatatgtcaaaagttttacaagttg 629
Query: 791 aactggaagc 800
| || |||||
Sbjct: 628 atcttgaagc 619