Jatropha Genome Database

JcCB0456101.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0456101.10 + phase: 2 /partial
         (796 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08803                                                            924   0.0  

>KJC_c08803 
          Length = 510

 Score =  924 bits (466), Expect = 0.0
 Identities = 508/514 (98%), Gaps = 6/514 (1%)
 Strand = Plus / Plus

                                                                       
Query: 74  aagcacggtgcaaaagtttgtatacttgatttgcaagacaaccttggtcagagtgtctgc 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagcacggtgcaaaagtttgtatacttgatttgcaagacaaccttggtcagagtgtctgc 60

                                                                       
Query: 134 gaatcccttggtggtgactcaaacacttgttatttccatggtaatgtcacaatagaagat 193
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaatcccttggtggtgactcaaacacttgttatttccatggtaatgtcacaatagaagat 120

                                                                       
Query: 194 gaggtccaacgtgccattgttttcaccgttgaaaaatttggaacactggatattctggtc 253
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggtccaacgtgccattgttttcaccgttgaaaaatttggaacactggatattctggtc 180

                                                                       
Query: 254 aacaatgctgggttatcaggtccaccctgttcagacatacgaaatgtaaatttatcagat 313
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 aacaatgctgggttatcaggtccaccctg-tcagacatacgaaatgtaaatttatcagat 239

                                                                       
Query: 314 ttcgaagaggtgtttgatgtaaatgtgaagggtgcatttattggaatgaagcatgcagca 373
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ttcgaagaggtgtttgatgtaaatgtgaagggtgcatttattggaatgaagcatgcagca 299

                                                                       
Query: 374 cggattatgatcccgctaaataagggttcgattgtttctatctgcagtgtcagcggtgta 433
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cggattatgatcccgctaaataagggttcgattgtttctatctgcagtgtcagcggtgta 359

                                                                       
Query: 434 ataggaggcctgggtccccatgcatatacagggtccaagcatgctcttttggggctgacc 493
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 360 ataggaggcctgggtccccatgcatatacagggtccaagcatgctc-tttggggctgacc 418

                                                                       
Query: 494 agaaatgttgcagctgaactaggaaaatatgggatacgtgtcaactgtgtttctccttat 553
           ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 419 agaaatgttgcagctgaactagg-aaatatgggatacgtgtcaactgtg-ttctccttat 476

                                             
Query: 554 gc-agttctaa-ccgacctggccttagctcactt 585
           || |||||||| ||||||||||||||||||||||
Sbjct: 477 gctagttctaacccgacctggccttagctcactt 510