Jatropha Genome Database
- JcCB0456051.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0456051.10 - phase: 1 /pseudo/partial
(671 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00206 1267 0.0
>KJC_c00206
Length = 2847
Score = 1267 bits (639), Expect = 0.0
Identities = 667/671 (99%), Gaps = 4/671 (0%)
Strand = Plus / Minus
Query: 1 tttgaggctcattaccaaggtgtttatcctgtgaaatgtaaccaggatcgtttttgttgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1952 tttgaggctcattaccaaggtgtttatcctgtgaaatgtaaccaggatcgtttt-gttgt 1894
Query: 61 tgaagatatcgtgagatttggatctccattccggttcggggttggaggccgggtctaaac 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1893 tgaagatatcgtgagatttggatctccattccggttcggg-ttggaggccgggtctaaac 1835
Query: 121 cggaactccttttggctatgagctgtttgtgcaagggaaatccagattctttccttgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 cggaactccttttggctatgagctgtttgtgcaagggaaatccagattctttccttgttt 1775
Query: 181 gtaacggtttcaaggatgcagagtacatttctctggcgttgcttgccaggaaactcgcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 gtaacggtttcaaggatgcagagtacatttctctggcgttgcttgccaggaaactcgcct 1715
Query: 241 tgaatacagtgattgtgcttgaacaagaagaagagctcgatttggttcttgaaatgagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 tgaatacagtgattgtgcttgaacaagaagaagagctcgatttggttcttgaaatgagca 1655
Query: 301 agaaattatctattaggcccgtgattggtgttcgagctaagctgagaactaagcattcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 agaaattatctattaggcccgtgattggtgttcgagctaagctgagaactaagcattcag 1595
Query: 361 gtcatttcggatctacttcaggtgagaaaggtaaatttgggttaaccacaacccagattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 gtcatttcggatctacttcaggtgagaaaggtaaatttgggttaaccacaacccagattt 1535
Query: 421 tacgggttgtgaagaagcttgagggagcaggaatgcttgattgcctccagttgctgcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 tacgggttgtgaagaagcttgagggagcaggaatgcttgattgcctccagttgctgcatt 1475
Query: 481 tccatatagggtctcagattccttccactgcgttgcttgctgatggtgtaggtgaggctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 tccatatagggtctcagattccttccactgcgttgcttgctgatggtgtaggtgaggctg 1415
Query: 541 cacagatctactgcgagttagtccgtcttggtgctcaaatgcaagtgcttagatattgga 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1414 cacagatctactgcgagttagtccgtcttggtgctcaaatgcaagtgctt-gatattgga 1356
Query: 601 ggcgggttgggaattgattatgatggatccaaatctaggtgattcggatatatctgttgc 660
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1355 ggcgggttgggaattgattatgatggatccaaatct-ggtgattcggatatatctgttgc 1297
Query: 661 ttatggactcg 671
|||||||||||
Sbjct: 1296 ttatggactcg 1286