Jatropha Genome Database

JcCB0453991.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0453991.10 - phase: 0 
         (402 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c01603                                                            644   0.0  

>KJC_c01603 
          Length = 820

 Score =  644 bits (325), Expect = 0.0
 Identities = 325/325 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaagagctggtgtctgattttgtttgtggttcttatggttcacaaacaggggagcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  atgaagagctggtgtctgattttgtttgtggttcttatggttcacaaacaggggagcttt 125

                                                                       
Query: 61  gtccaagtaaaagcagaggatgggtttgtaactacaaaaggagtgcagtttatgttgaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gtccaagtaaaagcagaggatgggtttgtaactacaaaaggagtgcagtttatgttgaat 185

                                                                       
Query: 121 gggagtccattttatgcaaatggattcaatgcctattggctcatgtattttgcaaatgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gggagtccattttatgcaaatggattcaatgcctattggctcatgtattttgcaaatgat 245

                                                                       
Query: 181 ccttctaccagaaataaagtctcctctgtttttcaagaagctaaagcgcatggccttgca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ccttctaccagaaataaagtctcctctgtttttcaagaagctaaagcgcatggccttgca 305

                                                                       
Query: 241 cttgctagaacttgggcttttaatgatggtcaagacagagctctacagtactcccctggc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cttgctagaacttgggcttttaatgatggtcaagacagagctctacagtactcccctggc 365

                                    
Query: 301 tcctacaatgaacaggccttccaag 325
           |||||||||||||||||||||||||
Sbjct: 366 tcctacaatgaacaggccttccaag 390