Jatropha Genome Database

JcCB0453321.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0453321.10 - phase: 0 /partial
         (453 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08648                                                            412   e-115

>KJC_c08648 
          Length = 755

 Score =  412 bits (208), Expect = e-115
 Identities = 215/216 (99%), Gaps = 1/216 (0%)
 Strand = Plus / Plus

                                                                       
Query: 22  gtcactgaagatttcatccccatcatttcaagaataaaagccagcatggcccctcttggt 81
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcactgaagatttcatccccatcatttcaagaataaaagccagcatggcccctcttggt 600

                                                                       
Query: 82  ggtcctaagggagaagtatcatatgctcgagagcatgaatctgtatggtttaagggaaaa 141
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 601 ggtcctaagggagaagtatcatatgctcgagagcatgaatctgtatggtttaaggg-aaa 659

                                                                       
Query: 142 cggtttgcaccggcagtttgggctggtaccccaggggaagaacaaattaaacagcttaaa 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cggtttgcaccggcagtttgggctggtaccccaggggaagaacaaattaaacagcttaaa 719

                                               
Query: 202 cctgctgtggactctaaaggtagaaaagttggcgag 237
           ||||||||||||||||||||||||||||||||||||
Sbjct: 720 cctgctgtggactctaaaggtagaaaagttggcgag 755