Jatropha Genome Database

JcCB0453091.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0453091.10 + phase: 0 
         (183 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00635                                                            353   9e-98

>KJC_c00635 
          Length = 1036

 Score =  353 bits (178), Expect = 9e-98
 Identities = 178/178 (100%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggacccattggtaactaaaggaccaactttagttcctttgcttggcattgatgtttggga 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggacccattggtaactaaaggaccaactttagttcctttgcttggcattgatgtttggga 415

                                                                       
Query: 66  gcatgcatactacttacagtacaagaatgtcagacctgattatctaaagaacatatggaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gcatgcatactacttacagtacaagaatgtcagacctgattatctaaagaacatatggaa 355

                                                                     
Query: 126 ggtaataaattggaagtatgcaagtgaagtgtatgcaaatgaatgcccttcagcttag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggtaataaattggaagtatgcaagtgaagtgtatgcaaatgaatgcccttcagcttag 297