Jatropha Genome Database

JcCB0450571.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0450571.10 - phase: 2 /partial
         (1144 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02116                                                             74   8e-13

>KJC_c02116 
          Length = 919

 Score = 73.8 bits (37), Expect = 8e-13
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 320 caacagtgtgaggataaatttaatgatttgaataaaaggtacaagagattgaatgagatt 379
           ||||| |||||||||||||||||||| |||||||||||||| |||||  ||||||| || 
Sbjct: 389 caacaatgtgaggataaatttaatgacttgaataaaaggtataagagggtgaatgatata 330

                
Query: 380 cttgg 384
           |||||
Sbjct: 329 cttgg 325