Jatropha Genome Database

JcCB0447941.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0447941.10 - phase: 0 /partial
         (282 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c05084                                                            385   e-107

>KJC_c05084 
          Length = 1013

 Score =  385 bits (194), Expect = e-107
 Identities = 194/194 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggtgtaacagtgcaagaaagtcttaaggagaaatccataggaattactgaagaaagtcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggtgtaacagtgcaagaaagtcttaaggagaaatccataggaattactgaagaaagtcta 436

                                                                       
Query: 61  ttacaactaaagtatgatccacggtctgtttggggttatattgaggttcatatagaacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttacaactaaagtatgatccacggtctgtttggggttatattgaggttcatatagaacaa 376

                                                                       
Query: 121 ggacctgtgctagaatgggctggttttccccttggtgtggttaaaggcatagctggacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggacctgtgctagaatgggctggttttccccttggtgtggttaaaggcatagctggacag 316

                         
Query: 181 actcggctaaaggt 194
           ||||||||||||||
Sbjct: 315 actcggctaaaggt 302