Jatropha Genome Database

JcCB0446791.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0446791.10 + phase: 0 /partial
         (383 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02761                                                            759   0.0  

>KJC_c02761 
          Length = 1711

 Score =  759 bits (383), Expect = 0.0
 Identities = 383/383 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcagctgcaaatggagtaaggcgtgtttgggttggtcaaaatggattactttcaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 atgtcagctgcaaatggagtaaggcgtgtttgggttggtcaaaatggattactttcaact 398

                                                                       
Query: 61  cctgctgtgtcagctgtaattcgtgaaagagtcggagtagatggatccaaagcaactgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cctgctgtgtcagctgtaattcgtgaaagagtcggagtagatggatccaaagcaactgga 458

                                                                       
Query: 121 gcatttatattgactgcaagtcacaatccaggtggtccacatgaggattttggaatcaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gcatttatattgactgcaagtcacaatccaggtggtccacatgaggattttggaatcaaa 518

                                                                       
Query: 181 tataacatggaaaatggtggacctgctcccgagggaatcacggataagatttatgagaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tataacatggaaaatggtggacctgctcccgagggaatcacggataagatttatgagaat 578

                                                                       
Query: 241 acaaagacaatcaaagagtacctaattgctgatctacctaatgttgatatttctgcaatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 acaaagacaatcaaagagtacctaattgctgatctacctaatgttgatatttctgcaatt 638

                                                                       
Query: 301 ggcgtgagtaattttagtgggcctgagggaccatttgatgttgaggtttttgactcagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ggcgtgagtaattttagtgggcctgagggaccatttgatgttgaggtttttgactcagca 698

                                  
Query: 361 agcgactatgtgaaattgatgaa 383
           |||||||||||||||||||||||
Sbjct: 699 agcgactatgtgaaattgatgaa 721