Jatropha Genome Database

JcCB0444931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0444931.10 + phase: 0 
         (228 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02246                                                            377   e-105

>KJC_c02246 
          Length = 1291

 Score =  377 bits (190), Expect = e-105
 Identities = 190/190 (100%)
 Strand = Plus / Plus

                                                                       
Query: 31  gtggatatgatagtcttaacggacggtagtcgtattcttgggctaggtgaccttggtgtt 90
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gtggatatgatagtcttaacggacggtagtcgtattcttgggctaggtgaccttggtgtt 751

                                                                       
Query: 91  caaggaataggtatacctattggaaagcttgatatgtatgttgctgctgctggtatcaat 150
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 caaggaataggtatacctattggaaagcttgatatgtatgttgctgctgctggtatcaat 811

                                                                       
Query: 151 ccacagagaatactcccagttatgttggatgttggtacaaacaaccaaaagctacttgag 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ccacagagaatactcccagttatgttggatgttggtacaaacaaccaaaagctacttgag 871

                     
Query: 211 gatcgtcttt 220
           ||||||||||
Sbjct: 872 gatcgtcttt 881