Jatropha Genome Database

JcCB0444641.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0444641.10 + phase: 0 
         (288 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09920                                                            327   8e-90

>KJC_c09920 
          Length = 762

 Score =  327 bits (165), Expect = 8e-90
 Identities = 165/165 (100%)
 Strand = Plus / Minus

                                                                       
Query: 37  tcacggagaaagcgggcaagaactccaacacctggacactatctgggactgaaaagtaat 96
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tcacggagaaagcgggcaagaactccaacacctggacactatctgggactgaaaagtaat 106

                                                                       
Query: 97  agagattatggttaccgaggcgatcgtgggaggtaccgtgatcgtggccgtgatgagtat 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 agagattatggttaccgaggcgatcgtgggaggtaccgtgatcgtggccgtgatgagtat 46

                                                        
Query: 157 cgtaggtctccaaggcgctctccttatcgtgggggtcatgattat 201
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  cgtaggtctccaaggcgctctccttatcgtgggggtcatgattat 1



 Score = 71.9 bits (36), Expect = 8e-13
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 1   atgttggcagcaatcaaagatgatcagttcatccat 36
           ||||||||||||||||||||||||||||||||||||
Sbjct: 495 atgttggcagcaatcaaagatgatcagttcatccat 460