Jatropha Genome Database
- JcCB0429581.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0429581.10 - phase: 0 /pseudo
(1233 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c09214 1374 0.0
KJC_c02106 226 1e-58
KJC_c03884 180 5e-45
KJC_c04937 145 3e-34
KJC_c03357 66 2e-10
KJC_c04492 54 8e-07
>KJC_c09214
Length = 787
Score = 1374 bits (693), Expect = 0.0
Identities = 731/739 (98%), Gaps = 5/739 (0%)
Strand = Plus / Plus
Query: 403 aactaccttgggcagctttatcatccaaatcttgtgaaattgattggtttctgcttagag 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aactaccttgggcagctttatcatccaaatcttgtgaaattgattggtttctgcttagag 112
Query: 463 gatgaccatcggcttttggtatatgagtttatgccaaagggtagcttggagaatcaccta 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 gatgaccatcggcttttggtatatgagtttatgccaaagggtagcttggagaatcaccta 172
Query: 523 ttcagaagggcttcttacgttcaacctctctcttggaatctcagaatgaagattgctctt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttcagaagggcttcttacgttcaacctctctcttggaatctcagaatgaagattgctctt 232
Query: 583 gatgctgccaagggtctcgcatttcttcatagtgataaagccaaagtgatatatcgagat 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gatgctgccaagggtctcgcatttcttcatagtgataaagccaaagtgatatatcgagat 292
Query: 643 ttcaaagcttccaatatactgctggattccaactacagtgctaaactatctgattttggg 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttcaaagcttccaatatactgctggattccaactacagtgctaaactatctgattttggg 352
Query: 703 ttggccaaggatgggccaacaggtagtaaaagccatgtttcgacaagagtaatgggtacc 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ttggccaaggatgggccaacaggtagtaaaagccatgtttcgacaagagtaatgggtacc 412
Query: 763 tatgggtatgcagctcctgagtatatggctacaggtcatctcactaaaaagagtgacata 822
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 413 tatgggtatgcagctcctgagtatatggctacaggtcatctcactaaaaagngtgacata 472
Query: 823 tacagtttcggtgttgttcttctcgaaatgctatctggcaggcgagctatagacaaaaac 882
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 473 tacagtttcggtgttgttcttctcgaaatgctatctggcaggcgagctatagac-aaaac 531
Query: 883 aagccttccagagaacaaaatttagttgagtgggcaagaccttatttaggcagcaaacgc 942
||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 532 cagccttccagaga--caaatttagttga-tgggcaagaccttatttaggcagcaaacgc 588
Query: 943 aaaatcttccaagttatggatgctcgcatcgaaggtcagtattctttaaaagatgcacta 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaaatcttccaagttatggatgctcgcatcgaaggtcagtattctttaaaagatgcacta 648
Query: 1003 aaagcggctactcttgctgtacaatgcctatctacagaaccgagatataggccgaacatg 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aaagcggctactcttgctgtacaatgcctatctacagaaccgagatataggccgaacatg 708
Query: 1063 gaagaagtggt-aaaagcattagaacaactgctcgagtccaatgacgacgaggtatctaa 1121
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gaagaagtggtaaaaagcattagaacaactgctcgagtccaatgacgacgaggtatctaa 768
Query: 1122 gggccctcgaactgaaatg 1140
|||||||||||||||||||
Sbjct: 769 gggccctcgaactgaaatg 787
>KJC_c02106
Length = 1126
Score = 226 bits (114), Expect = 1e-58
Identities = 524/658 (79%), Gaps = 2/658 (0%)
Strand = Plus / Minus
Query: 224 ccactaggaacttccgtccagatagtatgttgggtgaaggtggatttggttctgtgttca 283
||||||| |||||| | ||||||||| | |||| |||||||| ||||| || || ||||
Sbjct: 884 ccactagaaacttcagaccagatagtgtactgggagaaggtggttttggatcagttttca 825
Query: 284 aaggatggattgatgagcaaacactaacagctgccaagcctggaatgggcacggttattg 343
|||| |||||||||||||| | || ||||| ||||||||| |||| ||| ||||
Sbjct: 824 aagggtggattgatgagcattctctttcagctaccaagcctgattctggcatggtgattg 765
Query: 344 ctgtgaaaaggcttaaccaagatggtttccagggtcaccaggaatggctgaccgaaatca 403
||||||| |||||||| ||||| || |||||||||||| ||||||||||| | || ||||
Sbjct: 764 ctgtgaagaggcttaatcaagaagggttccagggtcacaaggaatggctggcagagatca 705
Query: 404 actaccttgggcagctttatcatccaaatcttgtgaaattgattggtttctgcttagagg 463
|||| |||||||| | | ||||| |||||||| || |||||||||| |||||| ||||
Sbjct: 704 actatcttgggcaattggagcatcctaatcttgttaagttgattggttactgctttgagg 645
Query: 464 atgaccatcggcttttggtatatgagtttatgccaaagggtagcttggagaatcacctat 523
|||||||||| |||||||| |||||||||||||| || ||| |||||||||| |||
Sbjct: 644 atgaccatcgccttttggtctatgagtttatgccccgtggcagcatggagaatcatttat 585
Query: 524 tcagaagggcttcttacgttcaacctctctcttggaatctcagaatgaagattgctcttg 583
| || || | ||| | ||| | | || |||||||| | | |||||| |||||||||
Sbjct: 584 ttaggagaggctctca-tttccagcactttcttggaacattcgtatgaag-ttgctcttg 527
Query: 584 atgctgccaagggtctcgcatttcttcatagtgataaagccaaagtgatatatcgagatt 643
|||||| || || || |||||||||||||||| | | || ||||| |||||||| || |
Sbjct: 526 gtgctgcaaaagggcttgcatttcttcatagtgctgatgcaaaagtcatatatcgggact 467
Query: 644 tcaaagcttccaatatactgctggattccaactacagtgctaaactatctgattttgggt 703
|||| |||| ||||||||||| ||| | ||||||| ||| || || ||||||||||| |
Sbjct: 466 tcaagacttctaatatactgcttgatacaaactacaatgcaaagctttctgattttggtt 407
Query: 704 tggccaaggatgggccaacaggtagtaaaagccatgtttcgacaagagtaatgggtacct 763
| |||| |||||||||||| ||| ||| |||||||| || ||||| || ||||| || |
Sbjct: 406 tagccagggatgggccaactggtgataagagccatgtgtccacaagggtcatgggaactt 347
Query: 764 atgggtatgcagctcctgagtatatggctacaggtcatctcactaaaaagagtgacatat 823
|||| ||||| || || |||||| | || ||||| ||| | ||| ||||| || |||
Sbjct: 346 atggatatgctgcaccagagtatttagccacaggccatttgactgctaagagcgatgtat 287
Query: 824 acagtttcggtgttgttcttctcgaaatgctatctggcaggcgagctatagacaaaaa 881
|||| || || ||||| ||||| ||||| ||||||| | |||||| ||||||||||
Sbjct: 286 acagctttggagttgtacttctagaaattttatctggtcgacgagctgtagacaaaaa 229
>KJC_c03884
Length = 1054
Score = 180 bits (91), Expect = 5e-45
Identities = 302/371 (81%), Gaps = 1/371 (0%)
Strand = Plus / Plus
Query: 431 atcttgtgaaattgattggtttctgcttagaggatgaccatcggcttttggtatatgagt 490
|||||||||| | ||||||| |||||||||||||| || ||||||||| | |||||||
Sbjct: 6 atcttgtgaagcttattggttattgcttagaggatgaacaccggcttttg-tgtatgagt 64
Query: 491 ttatgccaaagggtagcttggagaatcacctattcagaagggcttcttacgttcaacctc 550
| ||||| || |||||||||||||| |||| || || | ||||| | |||||||
Sbjct: 65 tcatgcctcgaggaagcttggagaatcatttatttaggagagggtcttatttccaacctc 124
Query: 551 tctcttggaatctcagaatgaagattgctcttgatgctgccaagggtctcgcatttcttc 610
| |||||||||||| | ||||| | ||||||| |||||| ||||| || ||||||||||
Sbjct: 125 tttcttggaatctccgcttgaaggtggctcttggtgctgctaaggggcttgcatttcttc 184
Query: 611 atagtgataaagccaaagtgatatatcgagatttcaaagcttccaatatactgctggatt 670
|||||| | || |||||| |||||||| |||||||| |||| || || || || ||||
Sbjct: 185 atagtgctgaaaacaaagttatatatcgggatttcaagacttctaacattctacttgatt 244
Query: 671 ccaactacagtgctaaactatctgattttgggttggccaaggatgggccaacaggtagta 730
| ||||||| ||| ||||| ||||||||||| |||||||||||||||||||| || ||
Sbjct: 245 cgaactacaatgcaaaactctctgattttggattggccaaggatgggccaactggcgata 304
Query: 731 aaagccatgtttcgacaagagtaatgggtacctatgggtatgcagctcctgagtatatgg 790
| || ||||| || || || | |||||||||||||| ||||||||||| |||||| |||
Sbjct: 305 atagtcatgtctctaccaggattatgggtacctatggatatgcagctccagagtatctgg 364
Query: 791 ctacaggtcat 801
| |||||||||
Sbjct: 365 ccacaggtcat 375
>KJC_c04937
Length = 1240
Score = 145 bits (73), Expect = 3e-34
Identities = 252/309 (81%), Gaps = 2/309 (0%)
Strand = Plus / Minus
Query: 223 gccactaggaacttccgtccagatagtatgttgggtgaaggtggatttggttctgtgttc 282
||||| || |||||||||||||||||| | ||||||||||||| ||||||| ||| |||
Sbjct: 765 gccaccagaaacttccgtccagatagtcttctgggtgaaggtggttttggttatgttttc 706
Query: 283 aaaggatggattgatgagcaaacactaacagctgccaagcctggaatgggcacggttatt 342
|| ||||||||||||||| | ||| | || ||||| ||||||||| || | |||| |
Sbjct: 705 aa-ggatggattgatgagaacacaatgactgctgcaaagcctggatcaggaatggttgta 647
Query: 343 gctgtgaaaaggcttaaccaagatggtttccagggtcaccaggaatggctgaccgaaatc 402
|| || || | |||||| | || ||||||||||||||| |||| ||| |||| ||| |
Sbjct: 646 gcagtcaagaagcttaaacctgagggtttccagggtcacaaggagtggttgacggaagtt 587
Query: 403 aactaccttgggcagctttatcatccaaatcttgtgaaattgattggtttctgcttagag 462
|| || ||||| || ||| |||||||||||||||| ||| ||||||||| |||||| |||
Sbjct: 586 aattatcttggccaacttcatcatccaaatcttgttaaactgattggttactgcttggag 527
Query: 463 gatgaccatcggcttttggtatatgagtttatgcc-aaagggtagcttggagaatcacct 521
| ||| | ||||||||||| |||||||| ||||| ||| || ||||| |||||||| ||
Sbjct: 526 ggtgagaaccggcttttggtctatgagttcatgccaaaaagggagcttagagaatcatct 467
Query: 522 attcagaag 530
||||||||
Sbjct: 466 gttcagaag 458
>KJC_c03357
Length = 588
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 484 tatgagtttatgccaaagggtagcttggagaatcacctattcagaaggg 532
|||||||| ||||||||||| || |||||||||||| ||||||||||||
Sbjct: 550 tatgagttcatgccaaagggaagtttggagaatcacttattcagaaggg 502
>KJC_c04492
Length = 671
Score = 54.0 bits (27), Expect = 8e-07
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 313 gctgccaagcctggaatgggcacggttattgctgtgaaaaggcttaaccaagatggttt 371
|||||||||||||||| || | ||| ||||| || ||||||||||||||||| |||||
Sbjct: 578 gctgccaagcctggaactggaatggtcattgccgttaaaaggcttaaccaagagggttt 636