Jatropha Genome Database

JcCB0429441.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0429441.10 + phase: 0 
         (222 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02320                                                            383   e-106

>KJC_c02320 
          Length = 714

 Score =  383 bits (193), Expect = e-106
 Identities = 200/201 (99%), Gaps = 1/201 (0%)
 Strand = Plus / Minus

                                                                       
Query: 3   ggcgccagtattgccgaattcccaaccatgggttgagaaatatcgaccaaagcaagttaa 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 ggcgccagtattgccgaattcccaaccatgggttgagaaatatcgaccaaagcaagttaa 655

                                                                       
Query: 63  agatgtggctcatcaggaggaggtggttcgggtcctcaccaacaccattgaaaccggtga 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 agatgtggctcatcaggaggaggtggttcgggtcctcaccaacaccattgaaaccggtga 595

                                                                       
Query: 123 ttgcccacacatgctgttttatggcccacctggtaccggaaaaaccacctccgctctggc 182
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 594 ttgcccacacatgctgttttatggcccacctggtaccgg-aaaaccacctccgctctggc 536

                                
Query: 183 catcgctcgccagctttttgg 203
           |||||||||||||||||||||
Sbjct: 535 catcgctcgccagctttttgg 515