Jatropha Genome Database

JcCB0428641.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0428641.10 - phase: 1 /partial
         (809 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00960                                                             60   9e-09

>KJC_c00960 
          Length = 1365

 Score = 60.0 bits (30), Expect = 9e-09
 Identities = 108/134 (80%)
 Strand = Plus / Minus

                                                                       
Query: 648 caaagagaagcagctttaacaaagtttcgcttgaagcggaaagatagatgctacgagaag 707
           ||||||||||| ||| | ||||||||  |  ||||||| |||||| ||||||| ||| | 
Sbjct: 224 caaagagaagctgctctgacaaagttcaggctgaagcgaaaagatcgatgctatgagcaa 165

                                                                       
Query: 708 aaggttcgctatgagagtaggaaaaaacttgcagagcaacggcctagagtgaaaggtcaa 767
           |||||||| ||  | ||  | |||| ||| || ||||| || |||||||||||||| || 
Sbjct: 164 aaggttcggtaccaaagccgaaaaagactagcggagcagcgtcctagagtgaaagggcag 105

                         
Query: 768 tttgttcgtcaagt 781
           ||||||||||||||
Sbjct: 104 tttgttcgtcaagt 91