Jatropha Genome Database

JcCB0428401.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0428401.10 - phase: 0 
         (441 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02571                                                            844   0.0  

>KJC_c02571 
          Length = 1183

 Score =  844 bits (426), Expect = 0.0
 Identities = 433/434 (99%), Gaps = 1/434 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggctgccataacaccaccaacatcatctcatctcctctccgcaagctcacgttcgctt 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 atggctgccataacaccaccaacatcatctcatctcctctccgcaagctcacgttcgctt 1074

                                                                        
Query: 61   tctcgcctctctcctttccaattatgcgtctttgacaccaagacactagtctcattcccc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 tctcgcctctctcctttccaattatgcgtctttgacaccaagacactagtctcattcccc 1014

                                                                        
Query: 121  agcaaccatatcagtaagaaaaaacatgttgctggtggagttaagtgtatggctgttagc 180
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 agcaaccatatcagta-gaaaaaacatgttgctggtggagttaagtgtatggctgttagc 955

                                                                        
Query: 181  accacctcagatgcagagaccaaaaagaaaaatatgttcgagattcaaacactgacaaat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954  accacctcagatgcagagaccaaaaagaaaaatatgttcgagattcaaacactgacaaat 895

                                                                        
Query: 241  tggctgttgaagcaggaacaggcaggcgttattgatgctgaacttactattgtgctctct 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894  tggctgttgaagcaggaacaggcaggcgttattgatgctgaacttactattgtgctctct 835

                                                                        
Query: 301  agtatttcaatggcatgtaagcagattgcttctttggtgcaaagagccagcatttctaac 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834  agtatttcaatggcatgtaagcagattgcttctttggtgcaaagagccagcatttctaac 775

                                                                        
Query: 361  ttaactggagttcagggtgctgttaatgttcaaggagaagaccagaagaagcttgatgtg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774  ttaactggagttcagggtgctgttaatgttcaaggagaagaccagaagaagcttgatgtg 715

                          
Query: 421  gtctctaatgaggt 434
            ||||||||||||||
Sbjct: 714  gtctctaatgaggt 701