Jatropha Genome Database

JcCB0426941.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0426941.10 + phase: 0 
         (1359 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09180                                                            938   0.0  

>KJC_c09180 
          Length = 573

 Score =  938 bits (473), Expect = 0.0
 Identities = 473/473 (100%)
 Strand = Plus / Minus

                                                                        
Query: 777  tcagtcgtcttctcctggaaagcatgcttttgttaagacatcaagaaaatcgaaaggagg 836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571  tcagtcgtcttctcctggaaagcatgcttttgttaagacatcaagaaaatcgaaaggagg 512

                                                                        
Query: 837  gaggagtaaacaaatcattaaagaagaacttagtgataaagacctgctttcagcttcaaa 896
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511  gaggagtaaacaaatcattaaagaagaacttagtgataaagacctgctttcagcttcaaa 452

                                                                        
Query: 897  ttactctcaaaccggttccagtatgaataatgctgaacctgaagagaaatcgggagccaa 956
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451  ttactctcaaaccggttccagtatgaataatgctgaacctgaagagaaatcgggagccaa 392

                                                                        
Query: 957  gcaagcagctaatttaagtgaatctatgctcaaaccctctcttaaaccttctggtgcaaa 1016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391  gcaagcagctaatttaagtgaatctatgctcaaaccctctcttaaaccttctggtgcaaa 332

                                                                        
Query: 1017 gaaatctgttcattctgttacttgggctgatgagaaatttgataacgctaaaagtagaaa 1076
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331  gaaatctgttcattctgttacttgggctgatgagaaatttgataacgctaaaagtagaaa 272

                                                                        
Query: 1077 tctttgtgaggttagagaaatggaagatacaaagtctggtcttgagattttagacagttt 1136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271  tctttgtgaggttagagaaatggaagatacaaagtctggtcttgagattttagacagttt 212

                                                                        
Query: 1137 ggagaacaataatgataacatgttgcgttttgaatcagcggaagcctgtgcaatagcatt 1196
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211  ggagaacaataatgataacatgttgcgttttgaatcagcggaagcctgtgcaatagcatt 152

                                                                 
Query: 1197 gagccaggcggcagaagctgttgcatctggagatgctgatgttaatgatgcta 1249
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151  gagccaggcggcagaagctgttgcatctggagatgctgatgttaatgatgcta 99