Jatropha Genome Database

JcCB0423521.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0423521.10 + phase: 0 /partial
         (444 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02034                                                            864   0.0  

>KJC_c02034 
          Length = 907

 Score =  864 bits (436), Expect = 0.0
 Identities = 443/444 (99%), Gaps = 1/444 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttataggaaaaaaggctgcttatgccttgagcgagggcctcggggtgatagcttgtatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tttataggaaaaaaggctgcttatgccttgagcgagggcctcggggtgatagcttgtatc 264

                                                                       
Query: 61  ggtgaactgttagaagaaagagaggcaggaaaaacctttgatgtttgttttcagcaattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtgaactgttagaagaaagagaggcaggaaaaacctttgatgtttgttttcagcaattg 324

                                                                       
Query: 121 aaggcctatgcagatgctgtacccagttgggataaaatagttattgcatatgagcctgta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggcctatgcagatgctgtacccagttgggataaaatagttattgcatatgagcctgta 384

                                                                       
Query: 181 tgggctattgggactggtaaagtggccacaccacagcaagctcaggaagttcatgtggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgggctattgggactggtaaagtggccacaccacagcaagctcaggaagttcatgtggct 444

                                                                       
Query: 241 cttcgtgattggcttaagaagaatgtctcggaagcagttgcatcaaaaacacggatcatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttcgtgattggcttaagaagaatgtctcggaagcagttgcatcaaaaacacggatcatc 504

                                                                       
Query: 301 tatggaggatctgtaaatggaggtaattgtgctgaacttgcaaagcaagaagatattgat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatggaggatctgtaaatggaggtaattgtgctgaacttgcaaagcaagaagatattgat 564

                                                                       
Query: 361 ggttttcttgttggaggtgcatccttaaagggccctgaatttgcaaccattgtcaattct 420
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 565 ggttttcttgttggaggtgcatccttaaa-ggccctgaatttgcaaccattgtcaattct 623

                                   
Query: 421 gtaacatccaagaaagttgctgct 444
           ||||||||||||||||||||||||
Sbjct: 624 gtaacatccaagaaagttgctgct 647