Jatropha Genome Database

JcCB0418191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0418191.10 + phase: 0 /pseudo/partial
         (498 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c04454                                                            561   e-160

>KJC_c04454 
          Length = 1123

 Score =  561 bits (283), Expect = e-160
 Identities = 283/283 (100%)
 Strand = Plus / Plus

                                                                        
Query: 91   aacagtgaagcaatgatctcgattgacatgccagctggaccttcagaagttttagttatt 150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  aacagtgaagcaatgatctcgattgacatgccagctggaccttcagaagttttagttatt 832

                                                                        
Query: 151  gctgacaaacatgccagtcctgttcatatagctgcagatttactatcccaggctgagcat 210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833  gctgacaaacatgccagtcctgttcatatagctgcagatttactatcccaggctgagcat 892

                                                                        
Query: 211  ggtcctgatagccaggttgtccttgtaattgttggggatggtgtggatctgaaagctatt 270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893  ggtcctgatagccaggttgtccttgtaattgttggggatggtgtggatctgaaagctatt 952

                                                                        
Query: 271  gaagaggaaatcagcaagcaatgtcagagtctaccaaggggagaatacgcatcaaaagcc 330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  gaagaggaaatcagcaagcaatgtcagagtctaccaaggggagaatacgcatcaaaagcc 1012

                                                       
Query: 331  ctgagccatagtttcaccgtctttgctcgtgacatggttgagg 373
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 ctgagccatagtttcaccgtctttgctcgtgacatggttgagg 1055