Jatropha Genome Database

JcCB0417211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0417211.10 - phase: 0 /pseudo/partial/short
         (103 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_s18836                                                            188   2e-48
KJC_c07380                                                            188   2e-48

>KJC_s18836 
          Length = 463

 Score =  188 bits (95), Expect = 2e-48
 Identities = 102/103 (99%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagattggggtccagtgatagtagcagtggtgctgttcgtgctgttaacgccaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atggcagattggggtccagtgatagtagcagtggtgctgttcgtgctgttaacgccaggg 344

                                                      
Query: 61  ctgttgtttcagataccaggaaaagggtagagtggtggagttt 103
           |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 345 ctgttgtttcagataccagg-aaagggtagagtggtggagttt 386


>KJC_c07380 
          Length = 373

 Score =  188 bits (95), Expect = 2e-48
 Identities = 102/103 (99%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcagattggggtccagtgatagtagcagtggtgctgttcgtgctgttaacgccaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atggcagattggggtccagtgatagtagcagtggtgctgttcgtgctgttaacgccaggg 175

                                                      
Query: 61  ctgttgtttcagataccaggaaaagggtagagtggtggagttt 103
           |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 176 ctgttgtttcagataccagg-aaagggtagagtggtggagttt 217