Jatropha Genome Database

JcCB0400871.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0400871.10 - phase: 0 /partial
         (252 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06898                                                            240   1e-63

>KJC_c06898 
          Length = 480

 Score =  240 bits (121), Expect = 1e-63
 Identities = 121/121 (100%)
 Strand = Plus / Minus

                                                                       
Query: 113 cggagcatgacttgcagtaccggcaacatcatcaccaccagcagtcgcaacaacgttccc 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cggagcatgacttgcagtaccggcaacatcatcaccaccagcagtcgcaacaacgttccc 421

                                                                       
Query: 173 attctatatcgccgcagaggactgggcctaggaggagaggaagcagtgggactggacctg 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 attctatatcgccgcagaggactgggcctaggaggagaggaagcagtgggactggacctg 361

            
Query: 233 g 233
           |
Sbjct: 360 g 360