Jatropha Genome Database
- JcCB0399161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0399161.10 + phase: 2 /pseudo/partial
(532 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05735 620 e-178
KJC_c03075 206 4e-53
>KJC_c05735
Length = 992
Score = 620 bits (313), Expect = e-178
Identities = 313/313 (100%)
Strand = Plus / Minus
Query: 220 cctggtcaatgtcccagttcatgtagttttaatggagattgtgttgatggaaggtgccac 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cctggtcaatgtcccagttcatgtagttttaatggagattgtgttgatggaaggtgccac 652
Query: 280 tgcttcctaggatttcatagtcctgattgtagcaaacgatcctgccctggtaattgcaat 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tgcttcctaggatttcatagtcctgattgtagcaaacgatcctgccctggtaattgcaat 592
Query: 340 ggtcgtggtgtgtgtctttcagatggggtctgtaaatgcaaaaatggttacactggcatc 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ggtcgtggtgtgtgtctttcagatggggtctgtaaatgcaaaaatggttacactggcatc 532
Query: 400 gactgctctactgctgtctgtgatgaacaatgcagccttcatggcggggtatgtgataat 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gactgctctactgctgtctgtgatgaacaatgcagccttcatggcggggtatgtgataat 472
Query: 460 ggagtttgtgaattccgatgctcggattatgcaggttacacttgtcagaacagctccaca 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ggagtttgtgaattccgatgctcggattatgcaggttacacttgtcagaacagctccaca 412
Query: 520 cttctctctagcc 532
|||||||||||||
Sbjct: 411 cttctctctagcc 399
Score = 327 bits (165), Expect = 2e-89
Identities = 172/173 (99%), Gaps = 1/173 (0%)
Strand = Plus / Minus
Query: 48 aggtgcatggcatcatcattagtacgcactgggtttgtgcggggttc-tgtgacccaagg 106
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 939 aggtgcatggcatcatcattagtacgcactgggtttgtgcggggttcgtgtgacccaagg 880
Query: 107 aaatggttgttatcagcacagatgtgtgaacagctcccttgaggttgctgtggatggtat 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 aaatggttgttatcagcacagatgtgtgaacagctcccttgaggttgctgtggatggtat 820
Query: 167 ttggaaagtgtgtcctgaagctggtggaccagttcaattccctggcttcaatg 219
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ttggaaagtgtgtcctgaagctggtggaccagttcaattccctggcttcaatg 767
>KJC_c03075
Length = 802
Score = 206 bits (104), Expect = 4e-53
Identities = 104/104 (100%)
Strand = Plus / Plus
Query: 48 aggtgcatggcatcatcattagtacgcactgggtttgtgcggggttctgtgacccaagga 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 aggtgcatggcatcatcattagtacgcactgggtttgtgcggggttctgtgacccaagga 535
Query: 108 aatggttgttatcagcacagatgtgtgaacagctcccttgaggt 151
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aatggttgttatcagcacagatgtgtgaacagctcccttgaggt 579