Jatropha Genome Database
- JcCB0398861.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0398861.10 + phase: 1 /partial
(557 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04769 821 0.0
KJC_c08415 204 2e-52
KJC_c01737 117 3e-26
>KJC_c04769
Length = 504
Score = 821 bits (414), Expect = 0.0
Identities = 495/508 (97%), Gaps = 12/508 (2%)
Strand = Plus / Plus
Query: 37 aactaattcatcagggacgtataattccctgtgattttattggtgttgtgaagagtc-ag 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 aactaattcatcagggacgtataattccctgtgattttattggtgttgtgaagagtccag 60
Query: 96 c-aacctgtataccttgaaggagaggttgtgaataaccatgatgaactcatgtctaactt 154
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 ccaacctgtataccttgaaggagaggttgtgaataaccatgatgaactcatgtc-aactt 119
Query: 155 ttttgcacagccagatgcccttgcttatgggaagacagcagagcagttgcaaaaagagaa 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ttttgcacagccagatgcccttgcttatgggaagacagcagagcagttgcaaaaagagaa 179
Query: 215 tgttccacagaatctaattcctcacaagactttctcaggcaataggccttctctcagtat 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgttccacagaatctaattcctcacaagactttctcaggcaataggccttctctcagtat 239
Query: 275 tctgctttcggcattagatgcttacaaaattggacagttgttggcaatctatgaacacag 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tctgctttcggcattagatgcttacaaaattggacagttgttggcaatctatgaacacag 299
Query: 335 agtagttgtgcaaggcttcatatggggaatcaattcttttgaccagtggggagttgagtt 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agtagttgtgcaaggcttcatatggggaatcaattcttttgaccagtggggagttgagtt 359
Query: 395 agggaagtcgctggctactcaagtaagaaagc-aacttcatgcatctcgtacaaagggag 453
|||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
Sbjct: 360 aggg-agtcgctggctactcaagta--aaagcaaacttcatgcatctcgtacaaagggng 416
Query: 454 aaccagtggagggctttaacttcagc-actacttcattg-ct-aaaaagatacctagagg 510
|||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||
Sbjct: 417 aaccagtggagggctttaacttcagcaactacttcattgactaaaaaagatacctagagg 476
Query: 511 -aaagttcggatgt-cccaaaaaatcct 536
||||||||||||| |||||||||||||
Sbjct: 477 taaagttcggatgtacccaaaaaatcct 504
>KJC_c08415
Length = 477
Score = 204 bits (103), Expect = 2e-52
Identities = 117/119 (98%), Gaps = 2/119 (1%)
Strand = Plus / Minus
Query: 439 ctcgtacaaagggagaaccagtggagggctttaacttcagcactacttcattgctaaaaa 498
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 474 ctcgtacaaagggagaaccagtg-agggctt-aacttcagcactacttcattgctaaaaa 417
Query: 499 gatacctagaggaaagttcggatgtcccaaaaaatcctcagactcttctccctcggata 557
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gatacctagaggaaagttcggatgtcccaaaaaatcctcagactcttctccctcggata 358
>KJC_c01737
Length = 805
Score = 117 bits (59), Expect = 3e-26
Identities = 68/70 (97%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 1 gggaaccagggacaaatggtcagcacag-tttttatcaactaattcatcagggacgtata 59
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 736 gggaaccagggacaaatggtcagcacagttttttancaactaattcatcagggacgtata 795
Query: 60 attccctgtg 69
||||||||||
Sbjct: 796 attccctgtg 805