Jatropha Genome Database
- JcCB0398801.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0398801.10 + phase: 0
(519 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00598 1025 0.0
KJC_s18796 771 0.0
KJC_c02807 52 1e-06
KJC_c02111 50 5e-06
>KJC_c00598
Length = 889
Score = 1025 bits (517), Expect = 0.0
Identities = 517/517 (100%)
Strand = Plus / Minus
Query: 1 atgagcgcagaggctgacaaatatgtcacgattaattttgaggagacagaacttcgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 atgagcgcagaggctgacaaatatgtcacgattaattttgaggagacagaacttcgttta 718
Query: 61 gggctacctggaggtggaggtggaggtggaggtaatactacaaatgaaggtgatcaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gggctacctggaggtggaggtggaggtggaggtaatactacaaatgaaggtgatcaaatt 658
Query: 121 gcaaagattaataatggaaagagaggattttcagaaactgtggatttaaagcttaatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gcaaagattaataatggaaagagaggattttcagaaactgtggatttaaagcttaatctt 598
Query: 181 tcgacgaaagagtcggggaaagaggagaagatgaaggagaaaactgatgttccttcttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tcgacgaaagagtcggggaaagaggagaagatgaaggagaaaactgatgttccttcttct 538
Query: 241 aatgatcctgcaaaaccaccagccaaagcacaggttgtgggttggccaccaattcgatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aatgatcctgcaaaaccaccagccaaagcacaggttgtgggttggccaccaattcgatca 478
Query: 301 ttccgaaagaatgtcatgtctgtccagaaaagcaatggtgatgaggctgaaaaggcagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttccgaaagaatgtcatgtctgtccagaaaagcaatggtgatgaggctgaaaaggcagcc 418
Query: 361 accgccactgctgccggtagcagcagtgcagcttttgtgaaggttagcatggacggagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 accgccactgctgccggtagcagcagtgcagcttttgtgaaggttagcatggacggagct 358
Query: 421 ccatatttaagaaaagtggacttgaaattgtacaagagctaccaagaactctcagacgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccatatttaagaaaagtggacttgaaattgtacaagagctaccaagaactctcagacgct 298
Query: 481 ctaggcaaaatgttcagctcctttacaattggtaatt 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctaggcaaaatgttcagctcctttacaattggtaatt 261
>KJC_s18796
Length = 467
Score = 771 bits (389), Expect = 0.0
Identities = 429/439 (97%), Gaps = 10/439 (2%)
Strand = Plus / Plus
Query: 80 gtggaggtggaggtaatactacaaatgaaggtgatcaaattgcaaagattaataatggaa 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggaggtggaggtaatactacaaatgaaggtgatcaaattgcaaagattaataatggaa 60
Query: 140 agagaggattttcagaaactgtggatttaaagcttaatctttcgacgaaagagtcgggga 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagaggattttcagaaactgtggatttaaagcttaatctttcgacgaaagagtcgggga 120
Query: 200 aagaggagaagatgaaggagaaaactgatgttccttcttctaatgatcctgcaaaaccac 259
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 a-gaggagaagatgaaggagaaaactgatgttccttcttctaatgatcctgcaaaaccac 179
Query: 260 cagccaaagcacaggttgtgggttggccaccaattcgatcattccgaaagaatgtcatgt 319
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cagccaa-------gttgtgggttggccaccaattcgatcattccgaaagaatgtcatgt 232
Query: 320 ctgtccagaaaagcaatggtgatgaggctgaaaaggcagccaccgccactgctgccggta 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 ctgtccagaaaagcaatggtgatgaggctgaaaaggcagccaccgccactgctgccggta 292
Query: 380 gcagcagtgcagc-ttttgtgaaggttagcatggacggagctccatatttaagaaaagtg 438
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gcagcagtgcagctttttgtgaaggttagcatggacggagctccatatttaagaaaagtg 352
Query: 439 gacttgaaattgtacaagagctaccaagaactctcagacgctctaggcaaaatgttcagc 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gacttgaaattgtacaagagctaccaagaactctcagacgctctaggcaaaatgttcagc 412
Query: 499 tcctttacaattggtaatt 517
||| |||||||||||||||
Sbjct: 413 tcc-ttacaattggtaatt 430
>KJC_c02807
Length = 794
Score = 52.0 bits (26), Expect = 1e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 449 tgtacaagagctaccaagaactctcagacgctctaggcaaaatgttcagctcctttacaa 508
||||||| ||||||||||| || || || || |||| |||||||||||| ||||| || |
Sbjct: 305 tgtacaaaagctaccaagagctatctgatgccctagccaaaatgttcagttccttcacta 364
Query: 509 ttggtaatta 518
| ||||||||
Sbjct: 365 tgggtaatta 374
Score = 50.1 bits (25), Expect = 5e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 247 cctgcaaaaccaccagccaaagcacaggttgtgggttggcc 287
||||| || |||||||||||||| || ||||||||||||||
Sbjct: 127 cctgccaagccaccagccaaagctcaagttgtgggttggcc 167
>KJC_c02111
Length = 1075
Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 69 tggaggtggaggtggaggtggaggt 93
|||||||||||||||||||||||||
Sbjct: 327 tggaggtggaggtggaggtggaggt 351