Jatropha Genome Database
- JcCB0397691.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0397691.10 - phase: 1 /partial
(698 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02976 686 0.0
KJC_c04251 293 3e-79
>KJC_c02976
Length = 1493
Score = 686 bits (346), Expect = 0.0
Identities = 369/374 (98%), Gaps = 2/374 (0%)
Strand = Plus / Minus
Query: 1 atcgacatggcatttactgggaatt-taacgagtatttcagtgaagccacttatgttgat 59
||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||
Sbjct: 376 atcgacatggcatttactgggaattataacgagtatttcagtgaagcaactgatgttgat 317
Query: 60 gctgttgtttatttgatgttggccaattctctgattcacaacaccttgccagatgctact 119
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gctgttgtt-atttgatgttggccaattctctgattcacaacaccttgccagatgctact 258
Query: 120 gtgattgccgaagacgtttcgggcatgcctggacttggtcatgatgtctctgagggggga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 257 gtgattgccgaagacgtttcgggcatgcctggacttggtcatgatgtctctgaaggggga 198
Query: 180 attggttttgactatcgcttggcaatggctatccctgacaaatggatagattacttgaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 attggttttgactatcgcttggcaatggctatccctgacaaatggatagattacttgaaa 138
Query: 240 aacaagagtgatgaagagtggtcaatggaggaaattgcatggagcttaactaataggagg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 aacaagagtgatgaagagtggtcaatggaggaaattgcatggagcttaactaataggagg 78
Query: 300 tacactgagaaatgtgttgcttatgctgagagtcatgaccaagccattgttggtgacaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tacactgagaaatgtgttgcttatgctgagagtcatgaccaagccattgttggtgacaag 18
Query: 360 acagttgccttttt 373
||||||||||||||
Sbjct: 17 acagttgccttttt 4
>KJC_c04251
Length = 992
Score = 293 bits (148), Expect = 3e-79
Identities = 148/148 (100%)
Strand = Plus / Plus
Query: 551 aagagaaggcaatgggtggagttatgataagtgcagacgccaatggaacctagttgacac 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagagaaggcaatgggtggagttatgataagtgcagacgccaatggaacctagttgacac 60
Query: 611 tgaacacttgagatacaagttcatgaatgcatttgacagagctatgaatgggcttgatga 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaacacttgagatacaagttcatgaatgcatttgacagagctatgaatgggcttgatga 120
Query: 671 aaagtattcgtttcttgcatcaacaaag 698
||||||||||||||||||||||||||||
Sbjct: 121 aaagtattcgtttcttgcatcaacaaag 148