Jatropha Genome Database

JcCB0391201.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0391201.10 + phase: 1 /partial
         (666 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c08357                                                            127   4e-29

>KJC_c08357 
          Length = 406

 Score =  127 bits (64), Expect = 4e-29
 Identities = 67/68 (98%)
 Strand = Plus / Plus

                                                                       
Query: 475 agatgagtcgaataatggacccaataattgattcaacttacaaagacatgtgggttgcaa 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 53  agatgagtcgaataatggacccaataattgattcaacttacaaagacatgtggattgcaa 112

                   
Query: 535 ctgcaaag 542
           ||||||||
Sbjct: 113 ctgcaaag 120