Jatropha Genome Database
- JcCB0389821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0389821.10 - phase: 1 /partial
(1310 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c04501 1098 0.0
>KJC_c04501
Length = 654
Score = 1098 bits (554), Expect = 0.0
Identities = 577/582 (99%), Gaps = 2/582 (0%)
Strand = Plus / Minus
Query: 730 tggatatattacatcagcagcagcaaccacagcagcagtcaataccagagactggccgtt 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tggatatattacatcagcagcagcaaccacagcagcagtcaataccagagactggccgtt 594
Query: 790 caatcaatgtgcaaccatcctgccttgttgtcccttctcagtcatcagccagtttccagg 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 caatcaatgtgcaaccatcctgccttgttgtcccttctcagtcatcagccagtttccagg 534
Query: 850 cgggaaattgtcctgcttccatcaatcagaattgcaacttcaaccggggtgctgttattg 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 cgggaaattgtcctgcttccatcaatcagaattgcaacttcaaccggggtgctgttattg 474
Query: 910 attacagtcttctgtcctctcaatcaaataatacaaatattggacacatacgggacgggg 969
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 attacagtcttctgtcctctcaatcaaataatacaaatattggacacatacgggacggg- 415
Query: 970 atctaaaaaatacaggtgtagtcagtgggtattcagcccctggttctatatctcccacat 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atctaaaaaatacaggtgtagtcagtgggtattcagcccctggttctatatctcccacat 355
Query: 1030 catcatgctctgtcaatgcagacagtggcatcacgcggcaagttcaaaattcaaccacaa 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 catcatgctctgtcaatgcagacagtggcatcacgcggcaagttcaaaattcaaccacaa 295
Query: 1090 cctttggtgcttccagacatatgccagggcttgctcctaatatttgtgacttccagggtt 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 cctttggtgcttccagacatatgccagggcttgctcctaatatttgtgacttccagggtt 235
Query: 1150 cttatggcacgaagttgggtgaagttcttgatcaaggaccgcttaggaatcttggatttg 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 cttatggcacgaagttgggtgaagttcttgatcaaggaccgcttaggaatcttggatttg 175
Query: 1210 ttggtaaagggactagtattccaacccggtttgcggtggatgagtttgaagtacccataa 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 174 ttggtaaagggactagtattccaacccggtttgcggtggatgagtttgaagtaccaataa 115
Query: 1270 acgacttgagccatggaaaagtcta-ttggagaacaatggga 1310
| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 114 gcaacttgagccatggaaaagtctatttggagaacaatggga 73