Jatropha Genome Database

JcCB0386201.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0386201.10 - phase: 0 
         (657 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06063                                                            618   e-177

>KJC_c06063 
          Length = 705

 Score =  618 bits (312), Expect = e-177
 Identities = 319/320 (99%), Gaps = 1/320 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggagaacaaccctaaattaggttcaggagaagcgaagagtattggcaataataacaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atggagaacaaccctaaattaggttcaggagaagcgaagagtattggcaataataacaat 600

                                                                       
Query: 61  aacaacgacagcgagagggaacaagagcaggaacagaaccttaatttaggttctgcaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aacaacgacagcgagagggaacaagagcaggaacagaaccttaatttaggttctgcaaac 540

                                                                       
Query: 121 gataataatggagatgaagaggaacaggaagcccagcctccacgccagtcttctagaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gataataatggagatgaagaggaacaggaagcccagcctccacgccagtcttctagaaga 480

                                                                       
Query: 181 actcccttcactaatctcagtcaggtcgatgctgacctcgctcttgcacgtaccctccaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 actcccttcactaatctcagtcaggtcgatgctgacctcgctcttgcacgtaccctccaa 420

                                                                       
Query: 241 gaacaggaaagggcatacatgatgttgagattcggcaatgaggggagtgattatggaagt 300
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 419 gaacaggaaagggcatacatgatgttgagattcggcaatga-gggagtgattatggaagt 361

                               
Query: 301 tgggaagctggaagctattt 320
           ||||||||||||||||||||
Sbjct: 360 tgggaagctggaagctattt 341



 Score =  272 bits (137), Expect = 1e-72
 Identities = 137/137 (100%)
 Strand = Plus / Minus

                                                                       
Query: 428 cttttgatgtgcatgctcatactgatgctgatgttgataataatcctgctgttgatcttg 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 cttttgatgtgcatgctcatactgatgctgatgttgataataatcctgctgttgatcttg 175

                                                                       
Query: 488 acccagccatgttttctagcgatgaggcctatgctagagccctacaagatgctgaagaaa 547
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 acccagccatgttttctagcgatgaggcctatgctagagccctacaagatgctgaagaaa 115

                            
Query: 548 gggaaatggctgctaga 564
           |||||||||||||||||
Sbjct: 114 gggaaatggctgctaga 98