Jatropha Genome Database
- JcCB0384321.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0384321.10 - phase: 2 /partial
(529 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00137 755 0.0
KJC_c01196 270 3e-72
KJC_c00265 218 1e-56
KJC_s14841 196 4e-50
KJC_s19401 157 3e-38
>KJC_c00137
Length = 1056
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 1 gttcaaagggtatgttttcaaaatcatgggagggtgtgacaaacaaggatttcccatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gttcaaagggtatgttttcaaaatcatgggagggtgtgacaaacaaggatttcccatgaa 236
Query: 61 gcagggagttctcactcctggtcgtgtccgtttgttgctacacagaggcaccccatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gcagggagttctcactcctggtcgtgtccgtttgttgctacacagaggcaccccatgttt 296
Query: 121 tcgtggatatggaagacggaatggtgagcgcaggagaaagtctgttcgcgggtgtattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcgtggatatggaagacggaatggtgagcgcaggagaaagtctgttcgcgggtgtattgt 356
Query: 181 tagtcaggacctttctgttttgaacttggttatagtgaagaagggtgaaaatgatttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tagtcaggacctttctgttttgaacttggttatagtgaagaagggtgaaaatgatttgcc 416
Query: 241 cggtttgactgacactgaaaaacctaggatgagaggtccaaagagggcatccaagatccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cggtttgactgacactgaaaaacctaggatgagaggtccaaagagggcatccaagatccg 476
Query: 301 gaagctttttaacctttccaaggaagatgatgtccgcaaatatgtcaacacataccgtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gaagctttttaacctttccaaggaagatgatgtccgcaaatatgtcaacacataccgtag 536
Query: 361 aacctttacaacaaaatctgg 381
|||||||||||||||||||||
Sbjct: 537 aacctttacaacaaaatctgg 557
>KJC_c01196
Length = 979
Score = 270 bits (136), Expect = 3e-72
Identities = 322/384 (83%)
Strand = Plus / Minus
Query: 1 gttcaaagggtatgttttcaaaatcatgggagggtgtgacaaacaaggatttcccatgaa 60
||||||||| ||||| || || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 786 gttcaaaggttatgtatttaagattatgggaggctgtgacaaacaaggttttccaatgaa 727
Query: 61 gcagggagttctcactcctggtcgtgtccgtttgttgctacacagaggcaccccatgttt 120
|||||||||||| ||||| || ||||| || | ||||| ||| |||| ||||| || ||
Sbjct: 726 gcagggagttctaactccaggccgtgttcgacttttgcttcaccgaggtaccccttgctt 667
Query: 121 tcgtggatatggaagacggaatggtgagcgcaggagaaagtctgttcgcgggtgtattgt 180
||||||||||| || || ||||| || || || || ||||||||||| || || |||||
Sbjct: 666 ccgtggatatgggaggcgtaatggagaacgaagaaggaagtctgttcgtggatgcattgt 607
Query: 181 tagtcaggacctttctgttttgaacttggttatagtgaagaagggtgaaaatgatttgcc 240
||||||||| || || ||||||||||||||||| || ||||| |||||| | ||| ||||
Sbjct: 606 tagtcaggatctctcagttttgaacttggttattgttaagaaaggtgaacaggatctgcc 547
Query: 241 cggtttgactgacactgaaaaacctaggatgagaggtccaaagagggcatccaagatccg 300
|| |||| |||||||| || ||||| ||||||||||| ||||||||||| |||||| |
Sbjct: 546 aggactgacagacactgagaagcctagaatgagaggtcctaagagggcatcaaagatcag 487
Query: 301 gaagctttttaacctttccaaggaagatgatgtccgcaaatatgtcaacacataccgtag 360
||| || |||||||| |||||||| ||||||||||| || ||||||||||| ||||| |
Sbjct: 486 gaaactgtttaacctctccaaggaggatgatgtccggaagtatgtcaacacttaccgccg 427
Query: 361 aacctttacaacaaaatctggtaa 384
||| |||||||| |||||||||||
Sbjct: 426 aacatttacaaccaaatctggtaa 403
>KJC_c00265
Length = 898
Score = 218 bits (110), Expect = 1e-56
Identities = 308/374 (82%)
Strand = Plus / Minus
Query: 11 tatgttttcaaaatcatgggagggtgtgacaaacaaggatttcccatgaagcagggagtt 70
||||||||||| || |||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 680 tatgttttcaagattatgggaggttgtgacaagcaagggtttcccatgaagcagggagtg 621
Query: 71 ctcactcctggtcgtgtccgtttgttgctacacagaggcaccccatgttttcgtggatat 130
| |||||||| |||||||| | ||||| |||||||| ||||| || ||||| || |||
Sbjct: 620 ttgactcctggccgtgtccgactcttgcttcacagaggaaccccttgctttcgcggttat 561
Query: 131 ggaagacggaatggtgagcgcaggagaaagtctgttcgcgggtgtattgttagtcaggac 190
||||| || ||||| || |||||||| |||||||| ||||| || ||||| || || |||
Sbjct: 560 ggaaggcgaaatggagaacgcaggaggaagtctgtccgcggatgcattgtcagccaagac 501
Query: 191 ctttctgttttgaacttggttatagtgaagaagggtgaaaatgatttgcccggtttgact 250
|||||||||||||||||||| || ||||||||||| || | ||| |||| || ||||
Sbjct: 500 ctttctgttttgaacttggtaattgtgaagaagggagagcaagatctgcctggactgaca 441
Query: 251 gacactgaaaaacctaggatgagaggtccaaagagggcatccaagatccggaagcttttt 310
|||||||| ||||| || |||||||| || |||||||| || |||||||| ||||| |||
Sbjct: 440 gacactgagaaaccaagaatgagaggacctaagagggcttcaaagatccgcaagctcttt 381
Query: 311 aacctttccaaggaagatgatgtccgcaaatatgtcaacacataccgtagaacctttaca 370
|| || || || || |||||||| || || || || || || ||||| ||| | || |||
Sbjct: 380 aatctctcaaaagaggatgatgttcggaagtacgtaaatacttaccgcagatcattcaca 321
Query: 371 acaaaatctggtaa 384
|| |||||||||||
Sbjct: 320 actaaatctggtaa 307
>KJC_s14841
Length = 393
Score = 196 bits (99), Expect = 4e-50
Identities = 222/263 (84%)
Strand = Plus / Minus
Query: 122 cgtggatatggaagacggaatggtgagcgcaggagaaagtctgttcgcgggtgtattgtt 181
||||||||||| || || ||||| || || || || ||||||||||| || || ||||||
Sbjct: 358 cgtggatatgggaggcgtaatggagaacgaagaaggaagtctgttcgtggatgcattgtt 299
Query: 182 agtcaggacctttctgttttgaacttggttatagtgaagaagggtgaaaatgatttgccc 241
|||||||| || || ||||||||||||||||| || ||||| |||||| | ||| ||||
Sbjct: 298 agtcaggatctctcagttttgaacttggttattgttaagaaaggtgaacaggatctgcca 239
Query: 242 ggtttgactgacactgaaaaacctaggatgagaggtccaaagagggcatccaagatccgg 301
|| |||| |||||||| || ||||| ||||||||||| ||||||||||| |||||| ||
Sbjct: 238 ggactgacagacactgagaagcctagaatgagaggtcctaagagggcatcaaagatcagg 179
Query: 302 aagctttttaacctttccaaggaagatgatgtccgcaaatatgtcaacacataccgtaga 361
|| || |||||||| |||||||| ||||||||||| || ||||||||||| ||||| ||
Sbjct: 178 aaactgtttaacctctccaaggaggatgatgtccggaagtatgtcaacacttaccgccga 119
Query: 362 acctttacaacaaaatctggtaa 384
|| |||||||| |||||||||||
Sbjct: 118 acatttacaaccaaatctggtaa 96
>KJC_s19401
Length = 489
Score = 157 bits (79), Expect = 3e-38
Identities = 179/211 (84%), Gaps = 1/211 (0%)
Strand = Plus / Plus
Query: 11 tatgttttcaaaatcatgggagggtgtgacaaacaaggatttcccatgaagcagggagtt 70
||||||||||| || |||||||| |||||||| ||||| ||||||||||||||||||||
Sbjct: 249 tatgttttcaagattatgggaggttgtgacaagcaagggtttcccatgaagcagggagtg 308
Query: 71 ctcactcctggtcgtgtccgtttgttgctacacagaggcaccccatgttttcgtggatat 130
| |||||||| |||||||| | ||||| |||||||| ||||| || ||||| || |||
Sbjct: 309 ttgactcctggccgtgtccgactcttgcttcacagaggaaccccttgctttcgcggttat 368
Query: 131 ggaagacggaatggtgagcgcaggagaaagtctgttcgcgggtgtattgttagtcaggac 190
||||| || ||||| || |||||||| |||||||| ||||| || ||||| || || |||
Sbjct: 369 ggaaggcgaaatggagaacgcaggaggaagtctgtccgcggatgcattgtcagccaagac 428
Query: 191 ctttctgttttgaacttggttatagtgaaga 221
||||||| |||||||||||| || |||||||
Sbjct: 429 ctttctg-tttgaacttggtaattgtgaaga 458