Jatropha Genome Database

JcCB0383651.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0383651.10 + phase: 0 /partial
         (205 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00228                                                            345   2e-95

>KJC_c00228 
          Length = 941

 Score =  345 bits (174), Expect = 2e-95
 Identities = 181/182 (99%), Gaps = 1/182 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   agtttcaccaataccaggttgttggaagagggttgcccactgagaatgatgagcatccaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 agtttcaccaataccaggttgttggaagagggttgcccactgagaatgatgagcatccaa 806

                                                                       
Query: 65  aaatttatcggatgaagctgtgggccactaatgaggttagggccaagtccaagttctggt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaatttatcggatgaagctgtgggccactaatgaggttagggccaagtccaagttctggt 746

                                                                       
Query: 125 acttcttgaggaagctgaaaaaggt-aagaagagcaatggccaagtacttgctattaacg 183
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 745 acttcttgaggaagctgaaaaaggtcaagaagagcaatggccaagtacttgctattaacg 686

             
Query: 184 ag 185
           ||
Sbjct: 685 ag 684