Jatropha Genome Database
- JcCB0380761.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0380761.10 + phase: 1 /partial
(1231 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c05700 1082 0.0
KJC_c06062 593 e-169
>KJC_c05700
Length = 608
Score = 1082 bits (546), Expect = 0.0
Identities = 588/598 (98%), Gaps = 3/598 (0%)
Strand = Plus / Plus
Query: 633 ggagacgtgcaaggatcatatatcgcagaagctataattgaaaatgtagcggctttt-ct 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 ggagacgtgcaaggatcatatatcgcagaagctataattgaaaatgtagcggctttttct 60
Query: 692 ttttatcagttcagattctgttagagccataaatctccatacgtataatacccttaagtt 751
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttatcagttcggattctgttagagccataaatctccatacgtataatacccttaagtt 120
Query: 752 atactatgatcttagcgcaggagaacctctagaatatactttaacttcaatatggaataa 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atactatgatcttagcgcaggagaacctctagaatatactttaacttcaatatggaataa 180
Query: 812 gttagccacaagttcgagctttgaacaaaggactgagctgataaaagagtttaataggtc 871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttagccacaagttcgagctttgaacaaaggactgagctgataaaagagtttaataggtc 240
Query: 872 taatgtgtggaagaaaagaggtatttctcgaatacctgtagtgtatgaagtcggaacaag 931
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatgtgtggaagaaaagaggtatttctcgaatacctgtagtgtatgaagtcggaacaag 300
Query: 932 accaacagctggaaaagtgagcattctaaacgatgggtctattgtggttgaagttggagg 991
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 accaactgctggaaaagtgagcattctaaacgatgggtctattgttgttgaagttggagg 360
Query: 992 acttgaaattggccagggcctctggacaaaggtaaaacagatggttgcttttgctcttag 1051
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acttg-aattggccagggcctctggacaaaggtaaaacagatggttgcttttgctcttag 419
Query: 1052 ttccatcaaatgtgatggagcaggagacctcttggataaagttcgagtcatacaatctga 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttccatcaaatgtgatggagcaggagacctcttggataaagttcgagtcatacaatctga 479
Query: 1112 taccttgagtttaactcaaggggggatgactgctgggagcactacatctgagtcgagctg 1171
||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||
Sbjct: 480 taccttgagtttaactcaaggggggttgactggtggcagcactacatctgagtcgagctg 539
Query: 1172 tgaagcagttagactttgctgtaatgttctggttgagagactgatggctgtgaaggaa 1229
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tg-agcagttagactttgctgtaatgttctggttgagagactgatggctgtgaaggaa 596
>KJC_c06062
Length = 578
Score = 593 bits (299), Expect = e-169
Identities = 366/393 (93%), Gaps = 19/393 (4%)
Strand = Plus / Minus
Query: 1 aattatctaccccaaccaaattggtgatgtatctaagggaatggctgaagcagataccaa 60
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 374 aattatctaccccaaacaaattggtgatgtatctaagggaatggctgaagcagataacaa 315
Query: 61 gattctatctgccgagactgaattatgacatccagataaaacttggttcacaatattact 120
||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 314 gattctatctgccgaga-------------------taaaacttggttcacaatattact 274
Query: 121 tctatatggagaatcaaactgctcttgctgtccctgatgaagacaattgcatggtggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tctatatggagaatcaaactgctcttgctgtccctgatgaagacaattgcatggtggttt 214
Query: 181 acagttctaatcaagcccccgaatatgcacacactgtaatcgcaaaatgtctcggtgttc 240
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 213 acagttctaatcaagcccccgaatatgcacacactgcaattgcaaaatgtctcggtgttc 154
Query: 241 ctgagcacaatgtgcgtgtgcttacaaggagggttggaggaggttttggtggaaaggcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 153 ctgagcacaatgtgcgtgtgcttacaaggagggttggaggaggttttggtggaaagggct 94
Query: 301 taaaagccatgcctgttgctacagcttgtgcacttgcagcacacaagttacaacgtcctg 360
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 93 taaaagccatgcctgttgctacagtttgtgcacttgcagcgcacaagttacaacgtcctg 34
Query: 361 tgagggtatatctcaatcgccacactgatatga 393
||||| |||||||||||||||||||||||||||
Sbjct: 33 tgaggctatatctcaatcgccacactgatatga 1