Jatropha Genome Database
- JcCB0379211.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0379211.10 - phase: 0 /partial
(538 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00851 1066 0.0
KJC_s19178 591 e-169
>KJC_c00851
Length = 3075
Score = 1066 bits (538), Expect = 0.0
Identities = 538/538 (100%)
Strand = Plus / Minus
Query: 1 ccagtggttgctagtgcagccttggttagtggtatccatttactccagacaaatccagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 ccagtggttgctagtgcagccttggttagtggtatccatttactccagacaaatccagag 2489
Query: 61 atagtgaaaaggtggagcaatgaggttcaggaagctgtgcagtcaagagctgcccttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 atagtgaaaaggtggagcaatgaggttcaggaagctgtgcagtcaagagctgcccttgta 2429
Query: 121 caatttcatgcactggcattactccatcagatacggcagaatgatcgactagctgtcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2428 caatttcatgcactggcattactccatcagatacggcagaatgatcgactagctgtcagc 2369
Query: 181 aaattagttaccagtctgactaggggaactgttcgctcgccgctggcccaatgcctcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2368 aaattagttaccagtctgactaggggaactgttcgctcgccgctggcccaatgcctcttg 2309
Query: 241 atacgttatacaagtcaggttattcgtgagtcaggtgctaacactcaaacaggggaccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2308 atacgttatacaagtcaggttattcgtgagtcaggtgctaacactcaaacaggggaccgt 2249
Query: 301 cctttctatgattttctggagggttgtttgcgccataaggcagagatggtgatttttgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2248 cctttctatgattttctggagggttgtttgcgccataaggcagagatggtgatttttgag 2189
Query: 361 gctgccagagctatcacagagcttagtggtgtcacaagccgagaattgactccagcaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 gctgccagagctatcacagagcttagtggtgtcacaagccgagaattgactccagcaatc 2129
Query: 421 actgttctgcagctctttttgagttcttccaaacctgtgctgagatttgctgctgtccgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2128 actgttctgcagctctttttgagttcttccaaacctgtgctgagatttgctgctgtccgc 2069
Query: 481 accttgaacaaggtggcaatgacacatccaatggcagtcactaactgcaacattgata 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2068 accttgaacaaggtggcaatgacacatccaatggcagtcactaactgcaacattgata 2011
>KJC_s19178
Length = 445
Score = 591 bits (298), Expect = e-169
Identities = 298/298 (100%)
Strand = Plus / Minus
Query: 234 cctcttgatacgttatacaagtcaggttattcgtgagtcaggtgctaacactcaaacagg 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctcttgatacgttatacaagtcaggttattcgtgagtcaggtgctaacactcaaacagg 386
Query: 294 ggaccgtcctttctatgattttctggagggttgtttgcgccataaggcagagatggtgat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggaccgtcctttctatgattttctggagggttgtttgcgccataaggcagagatggtgat 326
Query: 354 ttttgaggctgccagagctatcacagagcttagtggtgtcacaagccgagaattgactcc 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttttgaggctgccagagctatcacagagcttagtggtgtcacaagccgagaattgactcc 266
Query: 414 agcaatcactgttctgcagctctttttgagttcttccaaacctgtgctgagatttgctgc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcaatcactgttctgcagctctttttgagttcttccaaacctgtgctgagatttgctgc 206
Query: 474 tgtccgcaccttgaacaaggtggcaatgacacatccaatggcagtcactaactgcaac 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgtccgcaccttgaacaaggtggcaatgacacatccaatggcagtcactaactgcaac 148