Jatropha Genome Database
- JcCB0375591.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0375591.10 + phase: 0 /pseudo
(1472 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00240 2083 0.0
KJC_c00062 1130 0.0
KJC_s20859 192 2e-48
KJC_s18279 186 1e-46
KJC_c00182 64 1e-09
>KJC_c00240
Length = 1175
Score = 2083 bits (1051), Expect = 0.0
Identities = 1051/1051 (100%)
Strand = Plus / Plus
Query: 1 atggctgaacgcgttatcactcgtgttcacagcatccgtgagcgcttggatgagacactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atggctgaacgcgttatcactcgtgttcacagcatccgtgagcgcttggatgagacactt 184
Query: 61 aaagctcaccgcaatgaaattgtggccttactttcaagaattgaagctaagggaaaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaagctcaccgcaatgaaattgtggccttactttcaagaattgaagctaagggaaaagga 244
Query: 121 attcttcaacaccaccatatcattgctgagtttgaagcaattcctgaagagaacagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 attcttcaacaccaccatatcattgctgagtttgaagcaattcctgaagagaacagaaag 304
Query: 181 atcctattggatggtgtatttggtgaagttctgagatctgcacaggaagcaattgttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atcctattggatggtgtatttggtgaagttctgagatctgcacaggaagcaattgttttg 364
Query: 241 cctccatgggttgcccttgctgtgcgcccaaggcctggtgtttgggagtacatcagagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cctccatgggttgcccttgctgtgcgcccaaggcctggtgtttgggagtacatcagagtg 424
Query: 301 aatgtccatgcacttgtcgttgaggagttgcgtgttgctgagtatcttcacttcaaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aatgtccatgcacttgtcgttgaggagttgcgtgttgctgagtatcttcacttcaaggaa 484
Query: 361 gaacttgttgatggaagcaacaatggcaactttgtgcttgagttggactttgaaccattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gaacttgttgatggaagcaacaatggcaactttgtgcttgagttggactttgaaccattc 544
Query: 421 aatgcatctttccctcgcccaactctttcaaagtacattggtaatggtgtggagttcctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aatgcatctttccctcgcccaactctttcaaagtacattggtaatggtgtggagttcctc 604
Query: 481 aaccgtcacctttctgcaaaattgttccatgacaaggagagcttgcatcctctgcttgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aaccgtcacctttctgcaaaattgttccatgacaaggagagcttgcatcctctgcttgaa 664
Query: 541 tttctcaaggtccactgccacaagggaaagaacatgatgcttaatgacagaattcaaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tttctcaaggtccactgccacaagggaaagaacatgatgcttaatgacagaattcaaaac 724
Query: 601 ttgaattccttgcaatatgttctaaggaaggcagaggagtatctcacctcattgccatcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ttgaattccttgcaatatgttctaaggaaggcagaggagtatctcacctcattgccatcc 784
Query: 661 gagactccttactctgagtttgagcacaagttccaggaaattggcctggaaagagggtgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gagactccttactctgagtttgagcacaagttccaggaaattggcctggaaagagggtgg 844
Query: 721 ggtgatactgctgagcgtgttcttgagatgattagacttcttttggatcttcttgaggca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ggtgatactgctgagcgtgttcttgagatgattagacttcttttggatcttcttgaggca 904
Query: 781 ccagatccttgcacgcttgaaacattcttgggtagaatacctatggtcttcaacgttgtg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 ccagatccttgcacgcttgaaacattcttgggtagaatacctatggtcttcaacgttgtg 964
Query: 841 attatgtctcctcatggttactttgcacaagacaatgttttggggtaccctgacactgga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 attatgtctcctcatggttactttgcacaagacaatgttttggggtaccctgacactgga 1024
Query: 901 ggccaggttgtttatatcttggatcaagtccgtgccttggaggaggaaatgctccaccgc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 ggccaggttgtttatatcttggatcaagtccgtgccttggaggaggaaatgctccaccgc 1084
Query: 961 atcaagcagcaaggacttgatatcactccccgcattctcattattactcgacttctccct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 atcaagcagcaaggacttgatatcactccccgcattctcattattactcgacttctccct 1144
Query: 1021 gatgcagttggaaccacctgcggtcagcgcc 1051
|||||||||||||||||||||||||||||||
Sbjct: 1145 gatgcagttggaaccacctgcggtcagcgcc 1175
>KJC_c00062
Length = 1646
Score = 1130 bits (570), Expect = 0.0
Identities = 598/606 (98%), Gaps = 1/606 (0%)
Strand = Plus / Minus
Query: 856 ggttactttgcacaagacaatgttttggggtaccctgacactggaggccaggttgtttat 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 ggttactttgcacaagacaatgttttggggtaccctgacactggaggccaggttgtttat 1587
Query: 916 atcttgg-atcaagtccgtgccttggaggaggaaatgctccaccgcatcaagcagcaagg 974
||||| ||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 atcttcctatcccctgtgtgccttggaggaggaaatgctccaccgcatcaagcagcaagg 1527
Query: 975 acttgatatcactccccgcattctcattattactcgacttctccctgatgcagttggaac 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 acttgatatcactccccgcattctcattattactcgacttctccctgatgcagttggaac 1467
Query: 1035 cacctgcggtcagcgcctggaaaaagtatttggaacagaacattcggatattcttcgtat 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1466 cacctgcggtcagcgcctggaaaaagtatttggaacagaacattcggatattcttcgtat 1407
Query: 1095 tccatttagaactgagaagggaattgtccgtaaatggatctcccgatttgaagtgtggcc 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 tccatttagaactgagaagggaattgtccgtaaatggatctcccgatttgaagtgtggcc 1347
Query: 1155 ctatctagagacttacactgaggatgttgccactgaaattggcaaagagcttcagggcaa 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 ctatctagagacttacactgaggatgttgccactgaaattggcaaagagcttcagggcaa 1287
Query: 1215 gcctgatttgatcattggaaactacagtgatggaaacattgttgcttccttgttagctca 1274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 gcctgatttgatcattggaaactacagtgatggaaacattgttgcttccttgttagctca 1227
Query: 1275 caaattaggtgttacagagtgtacaattgctcatgctctagaaaaaaccaaatatccaga 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 caaattaggtgttacagagtgtacaattgctcatgctctagaaaaaaccaaatatccaga 1167
Query: 1335 atcagacatctactggaagaagtttgatgaaaagtaccatttctcatgccagtttacagc 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 atcagacatctactggaagaagtttgatgaaaagtaccatttctcatgccagtttacagc 1107
Query: 1395 tgatctttttgccatgaatcatacagatttcatcatcaccagtacattccaagaaattgc 1454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 tgatctttttgccatgaatcatacagatttcatcatcaccagtacattccaagaaattgc 1047
Query: 1455 tggaag 1460
||||||
Sbjct: 1046 tggaag 1041
>KJC_s20859
Length = 209
Score = 192 bits (97), Expect = 2e-48
Identities = 111/113 (98%), Gaps = 2/113 (1%)
Strand = Plus / Plus
Query: 1 atggctgaacgcgttatcactcgtgttcacagcatccgtgagcgcttggatgagacactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atggctgaacgcgttatcactcgtgttcacagcatccgtgagcgcttggatgagacactt 158
Query: 61 aaagctcaccgcaatgaaattgtggccttactttcaagaattgaagctaaggg 113
||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 159 aaagctcaccgcaatgaaattgtggccttac-ttcaag-attgaagctaaggg 209
>KJC_s18279
Length = 448
Score = 186 bits (94), Expect = 1e-46
Identities = 101/102 (99%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 932 gtgccttggaggaggaaatgctccaccgcatcaagcagcaaggacttgatatcact-ccc 990
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 445 gtgccttggaggaggaaatgctccaccgcatcaagcagcaaggacttgatatcactcccc 386
Query: 991 cgcattctcattattactcgacttctccctgatgcagttgga 1032
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgcattctcattattactcgacttctccctgatgcagttgga 344
>KJC_c00182
Length = 2760
Score = 63.9 bits (32), Expect = 1e-09
Identities = 191/244 (78%)
Strand = Plus / Minus
Query: 1216 cctgatttgatcattggaaactacagtgatggaaacattgttgcttccttgttagctcac 1275
|||||||| || || || |||||||||||||| || ||||||| || || || || |
Sbjct: 1504 cctgattttataatagggaactacagtgatgggaatcttgttgcatctttattggcctat 1445
Query: 1276 aaattaggtgttacagagtgtacaattgctcatgctctagaaaaaaccaaatatccagaa 1335
||| | ||||||||| ||||||| || || ||||| | || ||||| |||||||||||
Sbjct: 1444 aaaatgggtgttacacagtgtaccatcgcgcatgccttggagaaaacaaaatatccagat 1385
Query: 1336 tcagacatctactggaagaagtttgatgaaaagtaccatttctcatgccagtttacagct 1395
||||| || || ||||| || |||||||| || || || ||||| || || || || |||
Sbjct: 1384 tcagatatatattggaaaaaatttgatgataaatatcacttctcttgtcaattcactgct 1325
Query: 1396 gatctttttgccatgaatcatacagatttcatcatcaccagtacattccaagaaattgct 1455
|| | || |||||||| || ||||||| || ||||| ||||| | ||||||||||||
Sbjct: 1324 gacatattagccatgaacaatgcagattttataatcactagtacttaccaagaaattgca 1265
Query: 1456 ggaa 1459
||||
Sbjct: 1264 ggaa 1261
Score = 61.9 bits (31), Expect = 4e-09
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 814 agaatacctatggtcttcaacgttgtgattatgtctcctcatggttactttgcacaagac 873
|||||||| ||||| || || ||||| ||| ||||||| ||||| ||||||| ||||
Sbjct: 1906 agaataccgatggtgtttaatgttgttattttgtctccacatggatactttgggcaagca 1847
Query: 874 aatgttttggggtaccctgacactggaggccaggttgtttatatcttggatcaagtccgt 933
|||||| | || | ||||||||||| || |||||||||||||| | |||||||| |||
Sbjct: 1846 aatgttctaggtttgcctgacactggtgggcaggttgtttatatactagatcaagtacgt 1787
Query: 934 gcc 936
|||
Sbjct: 1786 gcc 1784