Jatropha Genome Database

JcCB0374481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0374481.10 - phase: 0 /partial
         (438 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c03757                                                            852   0.0  

>KJC_c03757 
          Length = 714

 Score =  852 bits (430), Expect = 0.0
 Identities = 437/438 (99%), Gaps = 1/438 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgaaagcaaaaggaaaaggtgctgatggttcttggctttggtgcactactgatgatact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttgaaagcaaaaggaaaaggtgctgatggttcttggctttggtgcactactgatgatact 329

                                                                       
Query: 61  gtttatgatgctgtcaagtcgatgacacatcacaatgttggagccttggtggtcgtgaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gtttatgatgctgtcaagtcgatgacacatcacaatgttggagccttggtggtcgtgaaa 389

                                                                       
Query: 121 cctggagagcagaaatcacttgcaggaattatcacagagagagattacctgaggaaaatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 390 cctggagagcagaaatcacttgcaggaattatcacagagagagattacctgaggaaa-tc 448

                                                                       
Query: 181 attgtacaaggaagatcatccaagtcaactaaggttggggacatcatgactgaagagaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 attgtacaaggaagatcatccaagtcaactaaggttggggacatcatgactgaagagaac 508

                                                                       
Query: 241 aagctcattacagtcactcccaacacaaaagttctgcaagcaatgcaattgatgacagat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aagctcattacagtcactcccaacacaaaagttctgcaagcaatgcaattgatgacagat 568

                                                                       
Query: 301 aaccgcatcaggcacattcctgtgatcaatgacaaggaaatgattggcatggtgtccatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 aaccgcatcaggcacattcctgtgatcaatgacaaggaaatgattggcatggtgtccatt 628

                                                                       
Query: 361 ggagatgttgtccgtgctgtggtggctgaacaccgggaggagctggaacgcctgaatgct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ggagatgttgtccgtgctgtggtggctgaacaccgggaggagctggaacgcctgaatgct 688

                             
Query: 421 tacatacaaggaggttat 438
           ||||||||||||||||||
Sbjct: 689 tacatacaaggaggttat 706