Jatropha Genome Database

JcCB0370211.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0370211.10 + phase: 0 /partial
         (488 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c02246                                                            952   0.0  

>KJC_c02246 
          Length = 1291

 Score =  952 bits (480), Expect = 0.0
 Identities = 486/488 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtggagacttgccagatttacggcttccagtttgggcctatcacggaggttctcgact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atgtggagacttgccagatttacggcttccagtttgggcctatcacggaggttctcgact 238

                                                                       
Query: 61  gcgatacctggtccctgtattgttcacaagcgtggtgctgatattcttcatgatccttgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gcgatacctggtccctgtattgttcacaagcgtggtgctgatattcttcatgatccttgg 298

                                                                       
Query: 121 tttaataaggatactgggtttcctttgactgaaagagatcgattaggcttgcgtggcctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tttaataaggatactgggtttcctttgactgaaagagatcgattaggcttgcgtggcctc 358

                                                                       
Query: 181 cttccacctcgtgtcatatcatttgagcagcaatatgctcgttttagggagtcatatcga 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 359 cttccacctcgtgtcatatcatttgagcagcaatatgctcgttttatggagtcatatcga 418

                                                                       
Query: 241 tcactggagaaaaatactcagggacaaccagatagtgttgtatcattagcaaaatggagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tcactggagaaaaatactcagggacaaccagatagtgttgtatcattagcaaaatggagg 478

                                                                       
Query: 301 atcttgaataggcttcctgacaggaatgagacattatactacagagtccttattgataat 360
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atcttgaataggcttcatgacaggaatgagacattatactacagagtccttattgataat 538

                                                                       
Query: 361 atcaagaattttgctccaataatatacacgccaactgtagggttggtgtgccagaattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atcaagaattttgctccaataatatacacgccaactgtagggttggtgtgccagaattat 598

                                                                       
Query: 421 tcaggtctatttagacgtccgcgtggaatgtattttagtgcaaaggataaaggggagatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tcaggtctatttagacgtccgcgtggaatgtattttagtgcaaaggataaaggggagatg 658

                   
Query: 481 atgtcaat 488
           ||||||||
Sbjct: 659 atgtcaat 666