Jatropha Genome Database
- JcCB0369881.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0369881.10 + phase: 0 /pseudo/partial
(709 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00179 1312 0.0
>KJC_c00179
Length = 2295
Score = 1312 bits (662), Expect = 0.0
Identities = 702/709 (99%), Gaps = 6/709 (0%)
Strand = Plus / Minus
Query: 1 gaagaagacttgaagaatttccgtcaatggggaagcaggacccctggacaccctgagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1747 gaagaagacttgaagaatttccgtcaatggggaagcaggacccctggacaccctgagaat 1688
Query: 61 tttgagacacctggtgttgaggtcacaactggtcctcttggacagggtatcgccaatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1687 tttgagacacctggtgttgaggtcacaactggtcctcttggacagggtatcgccaatgct 1628
Query: 121 gttggtttggctcttgcagagaagcatttagctgctcgctacaacaagccagacaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1627 gttggtttggctcttgcagagaagcatttagctgctcgctacaacaagccagacaatgaa 1568
Query: 181 attgttgaccactacacatacgttatattaggagacggttgtcaaatggagggcatcgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 attgttgaccactacacatacgttatattaggagacggttgtcaaatggagggcatcgca 1508
Query: 241 aatgaagcttgttcccttgctggacattggggactaggaaagttgattgctttctatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 aatgaagcttgttcccttgctggacattggggactaggaaagttgattgctttctatgat 1448
Query: 301 gacaaccacatctccatcgacggtgacacagcaattgcattcactgagagtgttgacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 gacaaccacatctccatcgacggtgacacagcaattgcattcactgagagtgttgacaaa 1388
Query: 361 cgattcgagggtcttggttggcatgttatctgggtgaagaatggaaacactggctatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1387 cgattcgagggtcttggttggcatgttatctgggtgaagaatggaaacactggctatgat 1328
Query: 421 gagattcgtgctgccattaaggaggccaaggctgtgaaagacaagcccactttgatcaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 gagattcgtgctgccattaaggaggccaaggctgtgaaagacaagcccactttgatcaag 1268
Query: 481 gtaactacaaccattggttatggttctccaaacaaggcaaactcttacagtgtgcatggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 gtaactacaaccattggttatggttctccaaacaaggcaaactcttacagtgtgcatggg 1208
Query: 541 agtgcacttggtgccaaggaagttgatgctactaggaaaaaccttgggtggccatatgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 agtgcacttggtgccaaggaagttgatgctactaggaaaaaccttgggtggccatatgag 1148
Query: 601 cctttccatgttccagaggatgttaagaagcactggagtcgccatgtaccacgagggtgc 660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1147 cctttccatgttccagaggatgttaagaagcactggagtcgccatgtaccac-agggtgc 1089
Query: 661 taccgttcgaagtctagaatggaatgacctaagtttgctgagtatgaga 709
|||| ||||||| || |||||||||| | |||||||||||||||||||
Sbjct: 1088 tacc-ttcgaag-ct-gaatggaatg--ccaagtttgctgagtatgaga 1045