Jatropha Genome Database
- JcCB0368641.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0368641.10 - phase: 1 /partial
(1268 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00126 2472 0.0
KJC_s15656 618 e-177
KJC_c00326 66 2e-10
KJC_c12791 54 9e-07
>KJC_c00126
Length = 2049
Score = 2472 bits (1247), Expect = 0.0
Identities = 1261/1268 (99%)
Strand = Plus / Minus
Query: 1 caagaaagcgtatgaaaatggcttctggttctgataataatttaaccgtttcatcttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 caagaaagcgtatgaaaatggcttctggttctgataataatttaaccgtttcatcttcat 1376
Query: 61 cttcactgtcatctccttctccgccatcacaaattacgatatctggtaatttgtcagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 cttcactgtcatctccttctccgccatcacaaattacgatatctggtaatttgtcagagt 1316
Query: 121 cagctcggcctgtagtcctaatcgactcacaggaaactggaattcgactcgtacatacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 cagctcggcctgtagtcctaatcgactcacaggaaactggaattcgactcgtacatacgc 1256
Query: 181 ttttagcgtgtgcagaagctgttcaacaagataatttgaaactagcagaagcattattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 ttttagcgtgtgcagaagctgttcaacaagataatttgaaactagcagaagcattattga 1196
Query: 241 agcacataggtttgctcgcggcgtctcaagctagttctatgagaaaagtcgctacttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 agcacataggtttgctcgcggcgtctcaagctagttctatgagaaaagtcgctacttatt 1136
Query: 301 ttgcagaagcattagctcgtcgaatttacaaaatctaccctcaagagagcttggatcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 ttgcagaagcattagctcgtcgaatttacaaaatctaccctcaagagagcttggatcctt 1076
Query: 361 cctattctgatactttagagatgcatttctacgaaacctgtccttacctcaaattcgctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 cctattctgatactttagagatgcatttctacgaaacctgtccttacctcaaattcgctc 1016
Query: 421 atttcacagctaatcaagccattctcgaggcattttcaactgcaaatcgagtacatgtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 atttcacagctaatcaagccattctcgaggcattttcaactgcaaatcgagtacatgtga 956
Query: 481 ttgattttgggcttaaacaaggtatgcagtggccggcgcttatgcaagcacttgctttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ttgattttgggcttaaacaaggtatgcagtggccggcgcttatgcaagcacttgctttga 896
Query: 541 ggccaggtggcccgccgtctttccgtttaaccgggattggaccaccgcagcctaataata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 ggccaggtggcccgccgtctttccgtttaaccgggattggaccaccgcagcctaataata 836
Query: 601 ccgatactttgcagcaagtcggttggaagttagcgcaattggcggaagctattggtgttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ccgatactttgcagcaagtcggttggaagttagcgcaattggcggaagctattggtgttg 776
Query: 661 aatttgaattccgtggtttcgttgcgaatagtttggcggatctgcagccggaaatgctcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 aatttgaattccgtggtttcgttgcgaatagtttggcggatctgcagccggaaatgctcg 716
Query: 721 acgtccgccctgatgtcgagacggtcgccgtcaattcggttttcgagcttcaccgcctcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 acgtccgccctgatgtcgagacggtcgccgtcaattcggttttcgagcttcaccgcctcc 656
Query: 781 tggcccgtccaggtgggattgataaagttctttcctctgttaaagcaatgaagcctaaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tggcccgtccaggtgggattgataaagttctttcctctgttaaagcaatgaagcctaaaa 596
Query: 841 ttgtaaccattgttgaacaagaagcaaaccacaacggtccggnnnnnnnagaccggttta 900
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 595 ttgtaaccattgttgaacaagaagcaaaccacaacggtccggtttttttagaccggttta 536
Query: 901 ctgaagcgttgcattactattcgagtttgtttgactcgttggaaggatctgggtcagttg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ctgaagcgttgcattactattcgagtttgtttgactcgttggaaggatctgggtcagttg 476
Query: 961 taccgagtcaagacctggttatgtccgagttatacttaggaaggcagatttgtaatgttg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 taccgagtcaagacctggttatgtccgagttatacttaggaaggcagatttgtaatgttg 416
Query: 1021 tagcttgggaaggagcagaccgagttgagcgacatgagacgcttgctcagtggagaactc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tagcttgggaaggagcagaccgagttgagcgacatgagacgcttgctcagtggagaactc 356
Query: 1081 ggattgatgcagctgggttcgaaccggttcaccttggttcaaacgcgtataaacaagctg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ggattgatgcagctgggttcgaaccggttcaccttggttcaaacgcgtataaacaagctg 296
Query: 1141 gcatgttgttagatatattcgctggtggtgatgggtatagagtagaggaaaaagatggat 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gcatgttgttagatatattcgctggtggtgatgggtatagagtagaggaaaaagatggat 236
Query: 1201 gcttgatgcttggttggcatacgagaccgctaattgtcacctcggcttggaaacccggcg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gcttgatgcttggttggcatacgagaccgctaattgtcacctcggcttggaaacccggcg 176
Query: 1261 gttcgagt 1268
||||||||
Sbjct: 175 gttcgagt 168
>KJC_s15656
Length = 445
Score = 618 bits (312), Expect = e-177
Identities = 312/312 (100%)
Strand = Plus / Minus
Query: 25 ctggttctgataataatttaaccgtttcatcttcatcttcactgtcatctccttctccgc 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctggttctgataataatttaaccgtttcatcttcatcttcactgtcatctccttctccgc 253
Query: 85 catcacaaattacgatatctggtaatttgtcagagtcagctcggcctgtagtcctaatcg 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 catcacaaattacgatatctggtaatttgtcagagtcagctcggcctgtagtcctaatcg 193
Query: 145 actcacaggaaactggaattcgactcgtacatacgcttttagcgtgtgcagaagctgttc 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 actcacaggaaactggaattcgactcgtacatacgcttttagcgtgtgcagaagctgttc 133
Query: 205 aacaagataatttgaaactagcagaagcattattgaagcacataggtttgctcgcggcgt 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aacaagataatttgaaactagcagaagcattattgaagcacataggtttgctcgcggcgt 73
Query: 265 ctcaagctagttctatgagaaaagtcgctacttattttgcagaagcattagctcgtcgaa 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 ctcaagctagttctatgagaaaagtcgctacttattttgcagaagcattagctcgtcgaa 13
Query: 325 tttacaaaatct 336
||||||||||||
Sbjct: 12 tttacaaaatct 1
>KJC_c00326
Length = 1465
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 379 agatgcatttctacgaaacctgtccttacctcaaattcgctcatttcacagctaatcaag 438
||||||| ||||||||||| || || || |||||||||||||||||||| || |||||||
Sbjct: 351 agatgcacttctacgaaacttgcccatatctcaaattcgctcatttcactgcaaatcaag 410
Query: 439 c 439
|
Sbjct: 411 c 411
Score = 65.9 bits (33), Expect = 2e-10
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 840 attgtaaccattgttgaacaagaagcaaaccacaacggtccggnnnnnnnagaccggttt 899
||||| || ||||||||||||||||| ||||| || ||||||| |||||| |||
Sbjct: 815 attgttactattgttgaacaagaagcgaaccataatggtccggttttcttagaccgattt 874
Query: 900 actgaagcgttgcattactattcgagtttgtttgactcgttggaaggatc 949
||||| | |||||||| || |||| | ||||||||||||| ||||||||
Sbjct: 875 actgagtcattgcattattactcgactctgtttgactcgttagaaggatc 924
Score = 54.0 bits (27), Expect = 9e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1008 atttgtaatgttgtagcttgggaaggagcagaccgagttgagcgacatgagacgcttgct 1067
||||| |||||||| || || ||||| ||||||||||||||| |||| ||||| | ||
Sbjct: 974 atttgcaatgttgtggcatgtgaaggggcagaccgagttgagagacacgagacattaact 1033
Query: 1068 cagtggagaactcgg 1082
|||||| ||||||||
Sbjct: 1034 cagtggcgaactcgg 1048
>KJC_c12791
Length = 195
Score = 54.0 bits (27), Expect = 9e-07
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1008 atttgtaatgttgtagcttgggaaggagcagaccgagttgagcgacatgagacgcttgct 1067
||||| |||||||| || || ||||| ||||||||||||||| |||| ||||| | ||
Sbjct: 23 atttgcaatgttgtggcatgtgaaggggcagaccgagttgagagacacgagacattaact 82
Query: 1068 cagtggagaactcgg 1082
|||||| ||||||||
Sbjct: 83 cagtggcgaactcgg 97