Jatropha Genome Database

JcCB0368601.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0368601.10 + phase: 0 /pseudo
         (1122 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c06762                                                             90   1e-17

>KJC_c06762 
          Length = 637

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 102/121 (84%)
 Strand = Plus / Minus

                                                                       
Query: 578 tgatggtgtcacagtttttaatggagttacagggactgaaaaccgttgatggcgaggacc 637
           |||||||||| |||||| | |||||||| |||||  |||| || || || ||||||||||
Sbjct: 143 tgatggtgtcgcagtttatgatggagttgcagggtttgaagacagtggaaggcgaggacc 84

                                                                       
Query: 638 cgccaagaattctccattttaatccgagattgaagggtgattggagtgggaaacctgtga 697
           ||||||| ||||| ||||| |||||||| ||||  || |||||||||||||| || ||||
Sbjct: 83  cgccaaggattctgcatttcaatccgaggttgagaggagattggagtgggaagccggtga 24

            
Query: 698 t 698
           |
Sbjct: 23  t 23