Jatropha Genome Database

JcCB0366431.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0366431.10 - phase: 0 
         (684 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c09402                                                            797   0.0  

>KJC_c09402 
          Length = 617

 Score =  797 bits (402), Expect = 0.0
 Identities = 405/406 (99%)
 Strand = Plus / Minus

                                                                       
Query: 279 gaacaacaatctgttgctatctgaaccgaagcttcgagcaatagtggagaatgctaaact 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gaacaacaatctgttgctatctgaaccgaagcttcgagcaatagtggagaatgctaaact 555

                                                                       
Query: 339 gctgattaaggttcagcacgagtttggttctttcaacaactactgctggcggtttgtgaa 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gctgattaaggttcagcacgagtttggttctttcaacaactactgctggcggtttgtgaa 495

                                                                       
Query: 399 tcacaccccattgagaaatggattccgttatgcacgtcaagtaccagtcaagacaccgaa 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tcacaccccattgagaaatggattccgttatgcacgtcaagtaccagtcaagacaccgaa 435

                                                                       
Query: 459 agcagaactcataagcaaggatctaatgcaaagagggttccgctgtgtcggacctactgt 518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agcagaactcataagcaaggatctaatgcaaagagggttccgctgtgtcggacctactgt 375

                                                                       
Query: 519 tgtttattcattcatgcaggtggctgggatcgtcaacgatcatcttgtaacgtgtttcag 578
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 374 tgtttattcattcatgcaggtggctgggatcgtcaacgatcatcttgtaacgtgttccag 315

                                                                       
Query: 579 ataccaagaatgcaatgcaaatgtcaaaaagaattgcagccccaagatcgaagaaacaga 638
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ataccaagaatgcaatgcaaatgtcaaaaagaattgcagccccaagatcgaagaaacaga 255

                                                         
Query: 639 ggtagtagtaactaaagcattggagactacacacttatctcaatga 684
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggtagtagtaactaaagcattggagactacacacttatctcaatga 209