Jatropha Genome Database
- JcCB0361141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0361141.10 + phase: 0 /partial
(852 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02707 1116 0.0
>KJC_c02707
Length = 700
Score = 1116 bits (563), Expect = 0.0
Identities = 570/571 (99%), Gaps = 1/571 (0%)
Strand = Plus / Plus
Query: 240 tgaacgcgatcgtgaccgtgaaagagacagagctagagaccgcatccggagcactcgttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tgaacgcgatcgtgaccgtgaaagagacagagctagagaccgcatccggagcactcgttc 190
Query: 300 tcgcacccgttcacctgatcgcacccgcagtgctcgttctcgcacccgttcacctgaccg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcgcacccgttcacctgatcgcacccgcagtgctcgttctcgcacccgttcacctgaccg 250
Query: 360 cacccggtcacggcacactcgttcccgcactcgctctcctgaacgctatcgttcgcgatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cacccggtcacggcacactcgttcccgcactcgctctcctgaacgctatcgttcgcgatc 310
Query: 420 gcgttctccagagtctcgttctcaccgccgccatcgccaccagcgtaccccatcaccatc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gcgttctccagagtctcgttctcaccgccgccatcgccaccagcgtaccccatcaccatc 370
Query: 480 gccgccacgaaagcatcaccgccatgaaactgaagacggcagagaaaaggaacgggacag 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 371 gccgccacgaaagcatcaccgccatgaaactgaagacggcagagaaaagg-acgggacag 429
Query: 540 ggaaagagagagggataggcaaagagcagctgtatctgatttcgtggatggaatagcaag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggaaagagagagggataggcaaagagcagctgtatctgatttcgtggatggaatagcaag 489
Query: 600 agagcagttggagaagattgggaataataatgatggtgatggagagggagatttagaagg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 agagcagttggagaagattgggaataataatgatggtgatggagagggagatttagaagg 549
Query: 660 aggtttagttgatgaagatgaaattgagatgatgaagaaatttgggattccaattggctt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aggtttagttgatgaagatgaaattgagatgatgaagaaatttgggattccaattggctt 609
Query: 720 tgattcaacaaaagggaaaccagtgcctggtgcagatgttagcggagtaagggttgttac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tgattcaacaaaagggaaaccagtgcctggtgcagatgttagcggagtaagggttgttac 669
Query: 780 gaagcgacagcctcggcaatatatgaaccgt 810
|||||||||||||||||||||||||||||||
Sbjct: 670 gaagcgacagcctcggcaatatatgaaccgt 700
Score = 83.8 bits (42), Expect = 6e-16
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 110 catattgctctattccgatttaccggctatcagctagcatgg 151
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catattgctctattccgatttaccggctatcagctagcatgg 42