Jatropha Genome Database
- JcCB0360021.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0360021.10 - phase: 0 /partial
(441 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c01433 722 0.0
KJC_c00060 101 1e-21
>KJC_c01433
Length = 1400
Score = 722 bits (364), Expect = 0.0
Identities = 406/420 (96%)
Strand = Plus / Minus
Query: 10 aagaagtttggggtaacagagttcgtgaatccaaaagaccacaagaagcctgtccaagat 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagaagtttggggtaacagagttcgtgaatccaaaagaccacaagaagcctgtccaagag 562
Query: 70 gttttagctgagatgactaatggaggtgtagatcgaagcattgagtgcacaagaaatgtc 129
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 gttttagctgagatgactaatggaggtgtagatcgaagcattgagtgcacaggaaatgtc 502
Query: 130 caggccatgatttctgcatttgaaagtgttcatgatggttggggtgttgctgttcttgta 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caggccatgatttctgcatttgaaagtgttcatgatggttggggtgttgctgttcttgta 442
Query: 190 ggggtggctaacaaagatgatgtgttccagactcatcccttcaaattcttgagtgaaagg 249
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggtgcctaacaaagatgatgtgttccagactcatcccttcaaattcttgagtgaaagg 382
Query: 250 actctaaaggacactttttatgggaacttcaagcccctcactgatatacccttactcgcg 309
|||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 381 actctaaagggcactttttatgggaacttcaagcccctcgctgatgtacccttactcgcg 322
Query: 310 gagaagtacttgaataagcagcttgaattcgataaattcatcactcactctattccattc 369
|||||||||||||| ||| |||||||| |||||||||| |||||||||| | |||||||
Sbjct: 321 gagaagtacttgaacaaggagcttgaactcgataaatttatcactcactttgttccattg 262
Query: 370 tcaaagattaatacagctttcgatttaatgctcaaaggagaaggaattagatgtctaatc 429
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagagattaatacagctttcgatttaatgctcaaaggagaaggaattagatgtctaatc 202
>KJC_c00060
Length = 1411
Score = 101 bits (51), Expect = 1e-21
Identities = 147/179 (82%)
Strand = Plus / Plus
Query: 10 aagaagtttggggtaacagagttcgtgaatccaaaagaccacaagaagcctgtccaagat 69
||||||||||| || || ||||| |||||||||||||| || | |||||||| ||| |
Sbjct: 783 aagaagtttggtgttactgagtttgtgaatccaaaagatcatgacaagcctgttcaacag 842
Query: 70 gttttagctgagatgactaatggaggtgtagatcgaagcattgagtgcacaagaaatgtc 129
|| | ||||| |||||| |||| || || ||||| ||| | || ||||| ||| | ||
Sbjct: 843 gtaattgctgaaatgactgatgggggagttgatcggagcgtggaatgcactggaagtatc 902
Query: 130 caggccatgatttctgcatttgaaagtgttcatgatggttggggtgttgctgttcttgt 188
|| |||||||| || ||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 903 caagccatgatctcagcatttgaatgtgttcatgatggttggggtgttgctgtacttgt 961