Jatropha Genome Database
- JcCB0359161.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0359161.10 + phase: 0 /pseudo/partial
(1666 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c12516 634 0.0
KJC_c09050 434 e-121
>KJC_c12516
Length = 492
Score = 634 bits (320), Expect = 0.0
Identities = 409/436 (93%), Gaps = 2/436 (0%)
Strand = Plus / Minus
Query: 534 ctgggatattaaatggaaatctgatgtggacactaaccggaagtttgaatatgaatttgt 593
||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 492 ctgggatattagatggaaatctgatgtagac-ctaaccggaagtttgaatatgaatttgt 434
Query: 594 agaaatcttgtcagaatatactgaggatgttggtgcatctgttgcatatttgggcaaggt 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 agaaatcttgtcagaatatactgaggatgttggtgcatctgttgcatatttgggcaaggt 374
Query: 654 taagggctatgtgagtctttttt-gtcgaatcagcaaggaaggaaaagacaaatttcaaa 712
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 373 taagggctatgtgagtctttttttgtcgaatcaggaaggaaggaaaagacaaatttcaaa 314
Query: 713 ttccaccaggtgaactattccgcttctctcatatgattccatcatttaaattgacgggtg 772
|||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 313 ttccaccaggtgaattgttccgcttctctcacatgattccatcatttaaattgacgggtg 254
Query: 773 aggaaagacaaggtgtaccaaggggatcttttgaactcgatcctgcttctttgcccaaaa 832
|||||||||||||||| |||| |||||||||||||||||||||||||||||| || |||
Sbjct: 253 aggaaagacaaggtgtgccaaagggatcttttgaactcgatcctgcttctttatcccaaa 194
Query: 833 atattgaagaggtcgctcttgctgaagatatagtggttgacgttggtaaggcttatgctg 892
|||| |||||| | ||| ||||||||||||| | |||||| |||||||| || ||||||
Sbjct: 193 atatcgaagagattgctgttgctgaagatatggcggttgatattggtaagactcatgctg 134
Query: 893 tcagcacaggctcaaaatcatcagataaagtgaaatccaatgtggaatctgaaggaagta 952
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 133 acagcacaggttcaaaatcatcagataaagtgaaattcaatgtggaatctgaaggacgta 74
Query: 953 ctgctgctcagcaggc 968
||||||||||||||||
Sbjct: 73 ctgctgctcagcaggc 58
>KJC_c09050
Length = 544
Score = 434 bits (219), Expect = e-121
Identities = 389/443 (87%), Gaps = 2/443 (0%)
Strand = Plus / Minus
Query: 1 attctggtctagcttcttgtgaaaaaggtcataatggggagaaacaaaaagcaggtccaa 60
|||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 473 attctggttcagcttcttgtgcaaaaggtcataatggggagaaaaaaaaagcaggtccaa 414
Query: 61 agagctctttagaagaaaatcatcatgagagaagcaatgaggttcatattcattctgctt 120
|||||||||||||||||||| |||| ||| | |||||||||||||||| ||||||| |
Sbjct: 413 agagctctttagaagaaaatggtcataagaagatcaatgaggttcatattgattctgcat 354
Query: 121 cagattcaagctccaaatctgtatctgatcctgagctccatgagtgtcctgattccagat 180
||||||||||||| |||||| ||| | ||||||||||||||| | ||||||| ||||||
Sbjct: 353 cagattcaagctcaaaatctacatcagttcctgagctccatgaatatcctgat-ccagat 295
Query: 181 ttcaatgactttgacaaaggccggaatgaaggttgtttttcggtagggcagatctgggct 240
|| |||||||| |||||| ||||||| | || |||||| |||||||||||||||||
Sbjct: 294 tttaatgactt-gacaaaattaggaatgacaggtgcttttcgatagggcagatctgggct 236
Query: 241 gtatatgataccttggatgctatgcctagattttgtgctctaattaggaaagttttctct 300
|| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 235 gtttatgataccttggatgctatgcctagattttatgctcgaattaggaaagttttctct 176
Query: 301 cctaagttcaaattgcgggtaacctggctggagtcaaacccagatgatgaggatggaatt 360
|| |||||||||| ||||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 175 ccagggttcaaattgagggtaacctggctggagccagacccagatgatgatgatggaatc 116
Query: 361 gaatgggtcaatgagggtttgccaacttcatgtggtaatttcagacatggagactctgaa 420
|||||||||| |||| |||||| | ||||||||||| ||||||||||| |||| |||
Sbjct: 115 gaatgggtcagcgaggacttgccagcctcatgtggtaaattcagacatgggcactcagaa 56
Query: 421 aatactgaaaattgtcttatgtt 443
||||||||| || ||||||||||
Sbjct: 55 aatactgaagatcgtcttatgtt 33