Jatropha Genome Database
- JcCB0356071.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0356071.10 + phase: 0 /partial
(480 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c06897 640 0.0
KJC_c11091 591 e-169
>KJC_c06897
Length = 491
Score = 640 bits (323), Expect = 0.0
Identities = 377/391 (96%), Gaps = 3/391 (0%)
Strand = Plus / Minus
Query: 85 aggaggaatgcgaaatggagtccccctcaagctgctataattcccaatttccatcttcca 144
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 473 aggaggaatgcgaaatg-agtcgccctcaagctgctataattcccaatttccatcttcca 415
Query: 145 atgcgtagttttgaagttaaaaataggacatcatcagaggaaataaagtcccttagattg 204
||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 414 atgcg-agttttgaagttaaaataaggacatcatcagaggaaataaagtcccttagattg 356
Query: 205 ataacagccatcaaaaccccatatttacctgatggtagatttgaccttgaagcatatgat 264
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ataacagccatcaaa-ccccatatttacctgatggtagatttgaccttgaagcatatgac 297
Query: 265 gctttggtgaatatgcaaattgttgatggtgctgaaggcgtgattgttggtggcacaact 324
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 296 gctttggtgaatatgcaaattgttgacggtgctgaaggcgtgattgttggtggcacaact 237
Query: 325 ggtgaaggtcagttgatgagctgggatgaacacataatgcttattggtcacactgttaac 384
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 236 ggtgaaggtcagttgatgagctgggatgaacacataatgcttattggtcacacagttaac 177
Query: 385 tgttttggtagttcaatcaaagtgattggaaataccggcagcaactctacaagggaagca 444
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 176 tgttttggtagttcaatcaaggtgattggaaatactggaagcaactctacaagggaagca 117
Query: 445 attcatgctacagtgcaaggctttgcagttg 475
||||||||||||| |||||| ||||||||||
Sbjct: 116 attcatgctacagagcaagggtttgcagttg 86
>KJC_c11091
Length = 546
Score = 591 bits (298), Expect = e-169
Identities = 319/322 (99%), Gaps = 3/322 (0%)
Strand = Plus / Plus
Query: 1 atggctgctttgagtggctatggtgtgttcttgaaagagtctgctctccagctaccgcgt 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 226 atggctgctttgagtggctatggtgtgttcttgaaag-gtctgctctccagctaccgcgt 284
Query: 61 tctgtttccaccaattactacaagaggaggaatgcgaaatggagtccccctcaagctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tctgtttccaccaattactacaagaggaggaatgcgaaatggagtccccctcaagctgct 344
Query: 121 ataattcccaatttccatcttccaatgcgtagttttgaagttaaaaataggacatcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ataattcccaatttccatcttccaatgcgtagttttgaagttaaaaataggacatcatca 404
Query: 181 gaggaaataaagtcccttagattgataacagccatcaaaaccccatatttacctgatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gaggaaataaagtcccttagattgataacagccatcaaaaccccatatttacctgatggt 464
Query: 241 agatttgaccttgaagcatatgatgctttggtgaatatgc-aaattgttgatggtgctga 299
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 465 agatttgaccttgaagcatatgatgctttggtgaatatgctaaattgttgatggtgctga 524
Query: 300 aggcgtga-ttgttggtggcac 320
|||||||| |||||||||||||
Sbjct: 525 aggcgtgagttgttggtggcac 546