Jatropha Genome Database

JcCB0354791.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0354791.10 - phase: 1 /partial
         (308 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00063                                                            157   2e-38

>KJC_c00063 
          Length = 1602

 Score =  157 bits (79), Expect = 2e-38
 Identities = 199/239 (83%)
 Strand = Plus / Plus

                                                                        
Query: 7    agacattcagtgaagctttggaaaccaccaagaccgtcatctggaatggaccaatgggag 66
            |||||||| |||||||||| || || ||||| || || || ||||||||||||||||| |
Sbjct: 1016 agacattctgtgaagctttagatactaccaaaacggttatttggaatggaccaatgggtg 1075

                                                                        
Query: 67   tgtttgaatttgacaagtttgcagttgggacagaggctattgcaaagaagctagcagagc 126
            | ||||| || || ||||||||||| || || ||||| ||||| |||||||| |||||||
Sbjct: 1076 tatttgagttcgaaaagtttgcagtgggaactgaggcaattgccaagaagcttgcagagc 1135

                                                                        
Query: 127  tcagtggcaagggagtgacaacaattattggaggtggagattctgttgcagctgtagaaa 186
            ||||||||||||| |||||||| || ||||||||||| || || ||||| ||||| || |
Sbjct: 1136 tcagtggcaagggcgtgacaactatcattggaggtggtgactcagttgctgctgtggaga 1195

                                                                       
Query: 187  aagtaggagttgctgatgttatgagccacatatcaactggtggtggtgccagtttggag 245
            | || ||  |||||||    ||||||||||| || ||||| ||||||||||| ||||||
Sbjct: 1196 aggttgggcttgctgacaagatgagccacatctcgactggaggtggtgccagcttggag 1254