Jatropha Genome Database
- JcCB0353461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0353461.10 - phase: 2 /partial
(838 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c00740 1624 0.0
KJC_c01059 52 2e-06
>KJC_c00740
Length = 1040
Score = 1624 bits (819), Expect = 0.0
Identities = 835/838 (99%), Gaps = 3/838 (0%)
Strand = Plus / Minus
Query: 1 ttgcaaggctgacgctgcagccctctgtgtcacgtgcgaccgtgacatccactccgcgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 ttgcaaggctgacgctgcagccctctgtgtcacgtgcgaccgtgacatccactccgcgaa 942
Query: 61 tccactggctcgacgacacgaacgagttcctgtgacgcctttctacgactcggtcagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 tccactggctcgacgacacgaacgagttcctgtgacgcctttctacgactcggtcagctc 882
Query: 121 ggcttccggcgttaagccaaacgcaataaacttcctcgatgaccgtcatttctccgacgt 180
||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 881 ggcttccggcgttaagccaaacgca-taaact--ctcgatgaccgtcatttctccgacgt 825
Query: 181 ggatggggacgccgatgtcagcagagaggaagcagaagcagcctcttggcttcttccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ggatggggacgccgatgtcagcagagaggaagcagaagcagcctcttggcttcttccaaa 765
Query: 241 ccctcccaaccctaaagttatggaaagtccggatctgaatacgggtcagtatgtgttctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ccctcccaaccctaaagttatggaaagtccggatctgaatacgggtcagtatgtgttctc 705
Query: 301 agaaatggaaccgtatctggatctagattacgggcctgtggatccaaaacttgaatcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 agaaatggaaccgtatctggatctagattacgggcctgtggatccaaaacttgaatcaca 645
Query: 361 agagcagaatagctcaggcacagatggcgttgtacctgtacaaagcaagagcgttcaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agagcagaatagctcaggcacagatggcgttgtacctgtacaaagcaagagcgttcaaac 585
Query: 421 tccattggtgaacgatcactgttttgagcttgacttctctggatccaaagcttttgctta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tccattggtgaacgatcactgttttgagcttgacttctctggatccaaagcttttgctta 525
Query: 481 cggctacaaagcgcaatgcctgagccacagtgtgtcttcctcatctctggacgtcggagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cggctacaaagcgcaatgcctgagccacagtgtgtcttcctcatctctggacgtcggagt 465
Query: 541 tgttccagatggcgggaacatggtggatatatcaaatccgtacagtagatcggtaagcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgttccagatggcgggaacatggtggatatatcaaatccgtacagtagatcggtaagcaa 405
Query: 601 tggaattgagtcggcaaatcagacggttcagctatcagcagtggacagagaagcgagggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tggaattgagtcggcaaatcagacggttcagctatcagcagtggacagagaagcgagggt 345
Query: 661 gttgaggtacagagaaaagagaaagaacagaaagttcgagaagacaattagatacgcatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gttgaggtacagagaaaagagaaagaacagaaagttcgagaagacaattagatacgcatc 285
Query: 721 gaggaaagcttatgcagaaacaaggccgcggatcaaaggaagatttgcaaagcgaaccga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gaggaaagcttatgcagaaacaaggccgcggatcaaaggaagatttgcaaagcgaaccga 225
Query: 781 cactgaagttgaagtggatcgcagtagtatctacggattcggcgtcgttccgtcgttt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 cactgaagttgaagtggatcgcagtagtatctacggattcggcgtcgttccgtcgttt 167
>KJC_c01059
Length = 1001
Score = 52.0 bits (26), Expect = 2e-06
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 1 ttgcaaggctgacgctgcagccctctgtgtcacgtgcgaccgtgacatccactccgcgaa 60
|||||| || |||||||| || || |||||||||||||| ||| || |||||||| ||
Sbjct: 827 ttgcaaagccgacgctgccgctctttgtgtcacgtgcgatgatgatattcactccgctaa 768
Query: 61 tccactggctcgacgacacgaacgagttcc 90
||||| ||||| || || |||||||||||
Sbjct: 767 cccactcgctcgccggcatgaacgagttcc 738