Jatropha Genome Database
- JcCB0341121.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0341121.10 + phase: 0 /partial
(711 letters)
Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09
21,225 sequences; 12,776,988 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KJC_c02106 1336 0.0
KJC_c03884 289 5e-78
KJC_c09214 141 3e-33
KJC_c04937 68 3e-11
KJC_c02774 68 3e-11
KJC_c03357 56 1e-07
>KJC_c02106
Length = 1126
Score = 1336 bits (674), Expect = 0.0
Identities = 702/711 (98%), Gaps = 2/711 (0%)
Strand = Plus / Minus
Query: 1 gcagagatcaactatcttgggcaattggagcatcctaatcttgttaagttgattggttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gcagagatcaactatcttgggcaattggagcatcctaatcttgttaagttgattggttac 655
Query: 61 tgctttgaggatgaccatcgccttttggtctatgagtttatgccccgtggcagcatggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tgctttgaggatgaccatcgccttttggtctatgagtttatgccccgtggcagcatggag 595
Query: 121 aatcatttatttaggagaggctctcatttccagccactttcttggaacattcgtatgaaa 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 594 aatcatttatttaggagaggctctcatttccagc-actttcttggaacattcgtatgaa- 537
Query: 181 gttgctcttggtgctgcaaaagggcttgcatttcttcatagtgctgatgcaaaagtcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gttgctcttggtgctgcaaaagggcttgcatttcttcatagtgctgatgcaaaagtcata 477
Query: 241 tatcgggacttcaagacttctaatatactgcttgatacaaactacaatgcaaagctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tatcgggacttcaagacttctaatatactgcttgatacaaactacaatgcaaagctttct 417
Query: 301 gattttggtttagccagggatgggccaactggtgataagagccatgtgtccacaagggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gattttggtttagccagggatgggccaactggtgataagagccatgtgtccacaagggtc 357
Query: 361 atgggaacttatggatatgctgcaccagagtatttagccacaggccatttgactgctaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atgggaacttatggatatgctgcaccagagtatttagccacaggccatttgactgctaag 297
Query: 421 agcgatgtatacagctttggagttgtacttctagaaattttatctggtcgacgagctgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agcgatgtatacagctttggagttgtacttctagaaattttatctggtcgacgagctgta 237
Query: 481 gacaaaaatcgaccatctgggcaacataacctggtggagtgggcaaagccttacctgaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gacaaaaatcgaccatctgggcaacataacctggtggagtgggcaaagccttacctgaca 177
Query: 541 aacnnnnnnngagttttccgcattttggacacacgtcttgatggtcagtactcccttacc 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 aacaaaaaaagagttttccgcattttggacacacgtcttgatggtcagtactcccttacc 117
Query: 601 cgggctcaaaaggtggctaaccttgcacttaattgcttagatgtagaaccaaagttcaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 cgggctcaaaaggtggctaaccttgcacttaattgcttagatgtagaaccaaagttcaga 57
Query: 661 ccaaacatggaggaagtggtaaaggcattagaggaagttcaagaatcaaat 711
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 ccaaacatggaggaagtggtaaaggcattagaggaagttcaagaatcaaat 6
>KJC_c03884
Length = 1054
Score = 289 bits (146), Expect = 5e-78
Identities = 348/414 (84%), Gaps = 1/414 (0%)
Strand = Plus / Plus
Query: 33 tcctaatcttgttaagttgattggttactgctttgaggatgaccatcgccttttggtcta 92
|||| ||||||| ||| | |||||||| ||||| |||||||| || || |||||| | ||
Sbjct: 1 tcctcatcttgtgaagcttattggttattgcttagaggatgaacaccggcttttg-tgta 59
Query: 93 tgagtttatgccccgtggcagcatggagaatcatttatttaggagaggctctcatttcca 152
|||||| ||||| || || ||| ||||||||||||||||||||||||| ||| |||||||
Sbjct: 60 tgagttcatgcctcgaggaagcttggagaatcatttatttaggagagggtcttatttcca 119
Query: 153 gccactttcttggaacattcgtatgaaagttgctcttggtgctgcaaaagggcttgcatt 212
|| ||||||||||| | || |||| || |||||||||||||| || |||||||||||
Sbjct: 120 acctctttcttggaatctccgcttgaaggtggctcttggtgctgctaaggggcttgcatt 179
Query: 213 tcttcatagtgctgatgcaaaagtcatatatcgggacttcaagacttctaatatactgct 272
||||||||||||||| ||||| ||||||||||| |||||||||||||| || || ||
Sbjct: 180 tcttcatagtgctgaaaacaaagttatatatcgggatttcaagacttctaacattctact 239
Query: 273 tgatacaaactacaatgcaaagctttctgattttggtttagccagggatgggccaactgg 332
|||| | |||||||||||||| || ||||||||||| || |||| |||||||||||||||
Sbjct: 240 tgattcgaactacaatgcaaaactctctgattttggattggccaaggatgggccaactgg 299
Query: 333 tgataagagccatgtgtccacaagggtcatgggaacttatggatatgctgcaccagagta 392
||||| || ||||| || || ||| | ||||| || ||||||||||| || ||||||||
Sbjct: 300 cgataatagtcatgtctctaccaggattatgggtacctatggatatgcagctccagagta 359
Query: 393 tttagccacaggccatttgactgctaagagcgatgtatacagctttggagttgt 446
| | |||||||| ||||| ||||| ||||| ||||| || || |||||||||||
Sbjct: 360 tctggccacaggtcatttaactgccaagagtgatgtctatagttttggagttgt 413
>KJC_c09214
Length = 787
Score = 141 bits (71), Expect = 3e-33
Identities = 290/363 (79%)
Strand = Plus / Plus
Query: 31 catcctaatcttgttaagttgattggttactgctttgaggatgaccatcgccttttggtc 90
||||| |||||||| || |||||||||| |||||| |||||||||||||| ||||||||
Sbjct: 74 catccaaatcttgtgaaattgattggtttctgcttagaggatgaccatcggcttttggta 133
Query: 91 tatgagtttatgccccgtggcagcatggagaatcatttatttaggagaggctctcatttc 150
|||||||||||||| || ||| |||||||||| |||| || || | ||| | |
Sbjct: 134 tatgagtttatgccaaagggtagcttggagaatcacctattcagaagggcttcttacgtt 193
Query: 151 cagccactttcttggaacattcgtatgaaagttgctcttggtgctgcaaaagggcttgca 210
|| || || |||||||| | | ||||| ||||||||| |||||| || || || |||
Sbjct: 194 caacctctctcttggaatctcagaatgaagattgctcttgatgctgccaagggtctcgca 253
Query: 211 tttcttcatagtgctgatgcaaaagtcatatatcgggacttcaagacttctaatatactg 270
||||||||||||| | | || ||||| |||||||| || ||||| |||| |||||||||
Sbjct: 254 tttcttcatagtgataaagccaaagtgatatatcgagatttcaaagcttccaatatactg 313
Query: 271 cttgatacaaactacaatgcaaagctttctgattttggtttagccagggatgggccaact 330
|| ||| | ||||||| ||| || || ||||||||||| || |||| ||||||||||||
Sbjct: 314 ctggattccaactacagtgctaaactatctgattttgggttggccaaggatgggccaaca 373
Query: 331 ggtgataagagccatgtgtccacaagggtcatgggaacttatggatatgctgcaccagag 390
||| ||| |||||||| || ||||| || ||||| || ||||| ||||| || || |||
Sbjct: 374 ggtagtaaaagccatgtttcgacaagagtaatgggtacctatgggtatgcagctcctgag 433
Query: 391 tat 393
|||
Sbjct: 434 tat 436
>KJC_c04937
Length = 1240
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 31 catcctaatcttgttaagttgattggttactgctttgaggatgaccatcgccttttggtc 90
||||| ||||||||||| |||||||||||||||| |||| ||| | || |||||||||
Sbjct: 565 catccaaatcttgttaaactgattggttactgcttggagggtgagaaccggcttttggtc 506
Query: 91 tatgagtttatgcc 104
|||||||| |||||
Sbjct: 505 tatgagttcatgcc 492
Score = 50.1 bits (25), Expect = 7e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 418 aagagcgatgtatacagctttggagttgt 446
||||| |||||||||||||||||||||||
Sbjct: 184 aagagtgatgtatacagctttggagttgt 156
>KJC_c02774
Length = 1312
Score = 67.9 bits (34), Expect = 3e-11
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 182 ttgctcttggtgctgcaaaagggcttgcatttcttcatagtgctgatgcaaaagtcatat 241
|||||||||| ||||| ||||||||||| || ||||||| |||||| | ||| ||||
Sbjct: 615 ttgctcttggagctgccaaagggcttgctttccttcataatgctgaaagaccagttatat 556
Query: 242 atcgggacttcaagacttctaatata 267
||||||||||||| || |||||||||
Sbjct: 555 atcgggacttcaaaacctctaatata 530
>KJC_c03357
Length = 588
Score = 56.0 bits (28), Expect = 1e-07
Identities = 130/164 (79%)
Strand = Plus / Minus
Query: 283 tacaatgcaaagctttctgattttggtttagccagggatgggccaactggtgataagagc 342
|||||||| |||||||| |||||||| |||| || ||||| || ||||| ||||| |
Sbjct: 367 tacaatgcgaagctttcagattttggcctagcaagagatggtcctactggagataatact 308
Query: 343 catgtgtccacaagggtcatgggaacttatggatatgctgcaccagagtatttagccaca 402
||||| || || || || |||||||| || ||||||||||| || ||| | |||||
Sbjct: 307 catgtttcaaccagagtggtgggaactcggggttatgctgcaccggaatatgtcgccact 248
Query: 403 ggccatttgactgctaagagcgatgtatacagctttggagttgt 446
|| || |||||| | ||||||||||| || |||||||| |||||
Sbjct: 247 ggtcacttgactccaaagagcgatgtgtatagctttggcgttgt 204