Jatropha Genome Database

JcCB0337681.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0337681.10 + phase: 0 /partial
         (231 letters)

Database: jatropha cDNA leaf/callus assembly
(MIRA3.0.5:c=standard,s=non-debris singleton) 2010/06/09 
           21,225 sequences; 12,776,988 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KJC_c00182                                                            458   e-129

>KJC_c00182 
          Length = 2760

 Score =  458 bits (231), Expect = e-129
 Identities = 231/231 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atggctaatcccaagttaggccgaatccctagcatgagagagcgcgtagaagatactctc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2725 atggctaatcccaagttaggccgaatccctagcatgagagagcgcgtagaagatactctc 2666

                                                                        
Query: 61   tctgctcaccgaaatgaacttgtttctcttctctgcaggtatgtggatcaagggaaagga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2665 tctgctcaccgaaatgaacttgtttctcttctctgcaggtatgtggatcaagggaaagga 2606

                                                                        
Query: 121  attttgcagccacacactttgatcgatgaactggatagtgttgtgggcgaggacggaaca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2605 attttgcagccacacactttgatcgatgaactggatagtgttgtgggcgaggacggaaca 2546

                                                               
Query: 181  aggctggggctaagagatggtccctttggcgaagcacttaaatctgctcaa 231
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2545 aggctggggctaagagatggtccctttggcgaagcacttaaatctgctcaa 2495